FC932445

Overview
NameFC932445
Unique NameFC932445
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_MEGAM (60S ribosomal protein L15 OS=Megalobrama amblycephala GN=rpl15 PE=2 SV=3)

HSP 1 Score: 254.988 bits (650), Expect = 2.904e-67
Identity = 121/191 (63.35%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQS+V+RFLLRVRCW+  QL+++HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+D  HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_HYPNO (60S ribosomal protein L15 OS=Hypophthalmichthys nobilis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 254.988 bits (650), Expect = 2.904e-67
Identity = 121/191 (63.35%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQS+V+RFLLRVRCW+  QL+++HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+D  HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 254.603 bits (649), Expect = 3.793e-67
Identity = 122/191 (63.87%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVL+SYW+ +DSTYK++EVILVD  HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 252.677 bits (644), Expect = 1.441e-66
Identity = 120/191 (62.83%), Postives = 145/191 (75.92%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+++HR  +P+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+STAEER GR    LRVL+SYW+ +DSTYK++EVILVD  HKAIRR+    WI   VHKHRE RGLT+ GKKSRG+ KGH+++ T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 251.906 bits (642), Expect = 2.458e-66
Identity = 120/191 (62.83%), Postives = 144/191 (75.39%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQS+V+RFLLRVRCW+  QL+++HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQ+K+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+D  HKAIRR+    WI   V KHRE RGLT+ GKKSRG+ KGH+++ T  G RR  WKR+NT    RYR
Sbjct:   14 KQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGLGKGHKFHLTIGGSRRAAWKRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.476e-66
Identity = 121/191 (63.35%), Postives = 142/191 (74.35%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+R+LLR+R W+  QL  +HR+ RP+RPDKARRLGY+AKQG+VIY           PV KG TYGKP +HGVNQLK  R L+S AEERVGRR   LRVLNSYWI QD++YKY+EVIL+D  H AIRRD +INWIC  VHKHRE RGLT+ GK SRGI KG+RY+ T  G RR  WKR+N +   R R
Sbjct:   14 KQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.220e-65
Identity = 119/191 (62.30%), Postives = 140/191 (73.30%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+R+LLR+R W+  Q+   HRA RPSRPDKARRLGYKAKQG+ I+           PV KG TYGKP +HGVNQLK  R L+S AEERVGRR   LRVLNSYW+ QD+ +KY+EVI+VDP H AIRRD  +NWICN VHKHRE RGLT+ GK SRG+ KG+RY+ T  G RR  W+R+N     RYR
Sbjct:   14 KQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLGKGYRYSQTIGGSRRACWRRRNRLHLRRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.154e-62
Identity = 118/192 (61.46%), Postives = 135/192 (70.31%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINK--GHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSD +RFLLRVRCWE   L   HRAS P+R DKARRLGYKA QG+V+Y            V  G T GKP  HGVN+LK  R L+S AEERVGRR  NLRVLNSYW+NQDSTYKYYEVILVD  H AIR D R NWIC PVHKHRE RGLT+ G K+RG+ +   HR + T+  R+  +KR+NT  + RYR
Sbjct:   14 KQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNTVVFHRYR 205          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 3.673e-62
Identity = 116/191 (60.73%), Postives = 135/191 (70.68%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLR+R W+   LN +HRA RP+RP+KARRLGYKAKQG+VIY           PV KGATYGKP +HGVNQLK  R L+S AEER GRR   LRVLNSYW+ QDSTYKY+EVILVD +H  IR+   +NWIC    KHRE RG T+ G+K RG+ +G  Y+ TK G RR  W R NT S  R R
Sbjct:   14 KQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLGRGFHYSQTKGGSRRSCWLRHNTLSLRRKR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.110e-61
Identity = 108/191 (56.54%), Postives = 140/191 (73.30%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSD +R+LLR+R W   QL+A+HR  RP+RP+KARRLGY+AKQG+V+Y           PV KG TYGKP  HGVN+LK  ++ ++ AE R GRR  +LRVLNSYW+ +DSTYK+YEV+L+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KG R++ T+ G +   WKR+NT+ + R R
Sbjct:   14 KQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204          
The following BLAST results are available for this feature:
BLAST of FC932445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_MEGAM2.904e-6763.3560S ribosomal protein L15 OS=Megalobrama amblyceph... [more]
RL15_HYPNO2.904e-6763.3560S ribosomal protein L15 OS=Hypophthalmichthys no... [more]
RL15_PELFU3.793e-6763.8760S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_PARDA1.441e-6662.8360S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_HYPMO2.458e-6662.8360S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_DROME5.476e-6663.3560S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_ANOGA1.220e-6562.3060S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_DICDI2.154e-6261.4660S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_ORCLI3.673e-6260.7360S ribosomal protein L15 OS=Orconectes limosus GN... [more]
RL15_CAEEL3.110e-6156.5460S ribosomal protein L15 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionC34208F09EF PostHarveN Citrus clementina cDNA clone C34208F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932445 ID=FC932445; Name=FC932445; organism=Citrus clementina; type=EST; length=709bp
AGAAGCAGTCCGATGTGATTCGCTTCCTGCTGCGCGTCCGATGCTGGGAG
CTCCACCAGCTGAACGCCATCCACCGTGCCTCGCGTCCCTCGCGCCCCGA
CAAGGCCCGTCGTCTCGGTTACAAGGCCAAGCAGGGTTACGTTATCTACC
GTGCCCGTGTCCGCCGCGGTGGCCGCAAACGCCCTGTCTCCAAGGGTGCC
ACCTACGGCAAGCCCACCAACCACGGTGTCAACCAGCTCAAGTACCAGCG
TGCTCTCAAGTCCACCGCTGAGGAGCGTGTTGGCCGTCGCGCTGCTAACT
TGCGCGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTAC
TACGAGGTCATCCTTGTCGACCCCCAGCACAAGGCCATCCGCCGTGATGC
CCGCATCAACTGGATCTGCAACCCCGTTCACAAGCACCGCGAGTCCCGTG
GCCTCACCGCCACTGGCAAGAAGTCCCGTGGTATCAACAAGGGTCACCGT
TACAACAACACCAAGGCTGGTCGCCGCCACACCTGGAAGCGCCAGAACAC
CCAGAGCTACTGGCGTTACCGTTAAGTGCGGTAGTGCACTTTCACAGTGG
TTTCGGCTGGATCATGTTGGCTACGGCATGTGGTCATTTATTCAGGCACT
TTCCCAGACAGTGTTATCCACGCTGGGCTCAACTTTAATGCAGACCAGCC
GGTTCTGTT
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