FC932445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 66 AIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI 485 ++ R RP+R D+AR LGYKAKQG V+ P K + KP+ G+N++ ++++ AEER ++ NL VLNSYW+ QD K+YEVILVD H +I+ D NW+C HK R +RGLT+ GKK RG+ Sbjct: 35 SVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGL 172
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 73/183 (39.89%), Postives = 100/183 (54.64%), Query Frame = 3 Query: 27 LLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXP-VSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572 L+R R + + AI R +P+R D+AR LGYKAKQG++I +KG +P G+ ++L+ AEER R+ NL VLNSY++ +D YK+YEVILVDP H AI D I WIC H+ R RGLT+ GKK RG+ K K ++ WKR+ + + R Sbjct: 24 LMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNKGR---RPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKS---RGLKYTIKYKWKRKQKERLLKKR 200
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 18 IRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKG 494 +R L+ R + + I R RP+R D+AR LGY+AK GY++ K +PT GV ++ +++K AEERV R+ N+ VLNSYW+ +D YK+YEVILVDP H AI+ D +I WIC H+ R RGL + GKK+RG+ N+G Sbjct: 18 VRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFKAGR--RPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRG 175
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28 Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 27 LLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKG 494 LL+ R + + A+ R RP+R D+AR LGY+AKQGYVI P KG KP+ G + +++L+ AEE+ R+ NL VLNSYW+ +D YK++EVI+VDP H I+ D +I WI HK R RGLT+ GKK RG+ NKG Sbjct: 22 LLKQRMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKG 176
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 66 AIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI 485 ++ R RP+R D+AR LGYKAKQG V+ P K + KP G+N++ ++++ AEER ++ N+ VLNSYW+ QD K+YEVILVDP +I+ D NW+C HK R +RGLT+ GKK RG+ Sbjct: 35 SVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVILVDPCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGL 172
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 27 LLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKG 494 LL+ R + + ++ R RP+R D+AR LGY+AKQGY+I P KG KP+ G + +++L+ AEE+ R+ NL VLNSYW+ +D YK++EVI+VDP H I+ D +I WI HK R RGLT+ GKK RG+ NKG Sbjct: 22 LLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKG 176
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 27 LLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKG 494 LL+ R + + + R RP+R D+AR LGY+AKQGYVI P KG KP+ G + +++L+ AEE+ R+ NL VLNSYW+ +D YK++EVI+VDP H I+ D +I WI HK R RGLT+ GKK RG+ NKG Sbjct: 22 LLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKG 176
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 3 Query: 66 AIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKGHRYNNTKAGRRHTWKR 542 ++ R RP+R D+AR LGYKAKQG V+ P K + KP G+N++ ++++ AEER +R N+ VLNSYW+ QD K+YE+ILVDP H +I+ D +W+ HK R +RGLT+ GKK RG+ KG + G R K+ Sbjct: 35 SVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKK 192
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28 Identity = 65/183 (35.52%), Postives = 99/183 (54.10%), Query Frame = 3 Query: 6 QSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQ 554 QSD + +LR R E + A+ R +P+R ++AR +GYKAKQG+V+ P +P GV + + AEE+ R+ NL VL SY++ +D YKYYE+I+VDP H I+ D + W+ +P ++ R RGLT+ GKK+RG+ K T +H WK++ + Sbjct: 14 QSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNSGR--RPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGTV---KHKWKKKEKE 191
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28 Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 66 AIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGI-NKG 494 AI R RP+R DKAR LGYKAKQG V+ K K GVN++ + L+ AEER R+ NLR LNSYW+ +D + K++E IL+DP+H AI+ D +NWIC+ HK+R RG T+ G+++RG+ N+G Sbjct: 37 AIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKAGRRTK--RQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRG 178 The following BLAST results are available for this feature:
BLAST of FC932445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932445 ID=FC932445; Name=FC932445; organism=Citrus clementina; type=EST; length=709bpback to top |