FC932448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_XYLFT (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=nuoB PE=3 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDRIVPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_XYLF2 (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain M23) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDRIVPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTKTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_VESOH (NADH-quinone oxidoreductase subunit B OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 669 FV LD V+N+ R GS+WPM+FGLACCAVEMM G++RYDLDRFGI+FRP+PRQSD+M+VAGTLTNKMAPALRKVYDQMP+P+WVIS GSCAN CDRIVPVDIYVPGCPPTAEALLYGI+QLQ K+ R Sbjct: 11 FVTMSLDRVINWARTGSLWPMTFGLACCAVEMMEAGSSRYDLDRFGIVFRPTPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPKWVISMGSCANGGGYYHYSYAVIRGCDRIVPVDIYVPGCPPTAEALLYGIMQLQDKIRR 152
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_STRMK (NADH-quinone oxidoreductase subunit B OS=Stenotrophomonas maltophilia (strain K279a) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 FV + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDR+VPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 FVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_STRM5 (NADH-quinone oxidoreductase subunit B OS=Stenotrophomonas maltophilia (strain R551-3) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 FV + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDR+VPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 FVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_RALEJ (NADH-quinone oxidoreductase subunit B OS=Ralstonia eutropha (strain JMP134) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 669 FV + D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVIS GSCAN CDRIVPVDIYVPGCPPTAEAL+YG++QLQ K+ R Sbjct: 11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKR 152
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB2_NITMU (NADH-quinone oxidoreductase subunit B 2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=nuoB2 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.747e-57 Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 669 FV + LD V+N+ R GS+WPM+FGLACCAVEMM GA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVIS GSCAN CDRIVPVDIYVPGCPPTAEALLYGI+QLQ K++R Sbjct: 11 FVTTSLDSVINWGRTGSMWPMTFGLACCAVEMMQAGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIHR 152
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_XYLFM (NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain M12) GN=nuoB PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.281e-57 Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+GI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDRIVPVD+YVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_XANCP (NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv. campestris GN=nuoB PE=3 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.281e-57 Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182
BLAST of FC932448 vs. ExPASy Swiss-Prot
Match: NUOB_XANCB (NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv. campestris (strain B100) GN=nuoB PE=3 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.281e-57 Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1 Query: 244 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISTGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDL 681 +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVIS GSCAN CDRIVPVDIYVPGCPPTAEAL+YGILQLQKK+ R + + Sbjct: 37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182 The following BLAST results are available for this feature:
BLAST of FC932448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932448 ID=FC932448; Name=FC932448; organism=Citrus clementina; type=EST; length=745bpback to top |