FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R +TS+YYRGA G ++VYDVT ++ NV +WL+E+ + N+ +L+GNK+DL V K FA+ + F+ETSA Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 77/150 (51.33%), Postives = 103/150 (68.67%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 + YDYL KL+LIGDSGVGKS LL RF+++ F +TIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G LL+YDVT +F NV W + +H N+ +LIGNK D VS E G+A A++ + F+E SA Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASA 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R PNI+++L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 256 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 + EYDYLFKL+LIG+SGVGKS LL RF+ + + + STIGV+F +++ +D K VK QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V WL+E+ + ++ +L+GNK DL+ V + K FA+ + F+ETSAL Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 75/151 (49.67%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGR-WLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +EYDYLFK+++IGDSG GKS+LL RF N ++ STIGV+F ++++IDN +K QIWDTAGQER+R ITS YYRGA G + VYDVT +F ++ WL+++ ++ N+ +LIGNK DL VS ++ K AEQ ++ ++E SA Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER R ITS+YYRGA G ++VYDVT ++ NV +WL+E+ + N+ +L+GNK+DL V K FA+ + F+ETSA Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37 Identity = 74/148 (50.00%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD+L KL+LIGDSGVGKS LL RF+ F +TIG++F R++ ++ K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F ++ W+R + +H ++ MLIGNK D+ V + GK+ A++ + F+ETSA Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSA 159
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37 Identity = 76/153 (49.67%), Postives = 108/153 (70.59%), Query Frame = 1 Query: 253 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQ-ESLYFMETSA 708 PDE+YD+LFKLVL+GD+ VGK+ ++ RF F+ STIGV+F ++L I K VK QIWDTAGQER+R IT +YYR A GA+L YD+T+ ++F +V W+ ++R++ NI+ +LIGNK+DL L VS + ++ AE + L +ETSA Sbjct: 11 PDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSA 163
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37 Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +Y YLFKL+LIGDSGVGKS LL RF + ++ STIGV+F R++ ++ K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT TF+NV +WL+E+ N+ +L+GNK+DL V KAFA+ + F+ETSA Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37 Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL-RHLVAVSTEDGKAFAEQESLYFMETSA 708 +YD L KL+L+GDSGVGKS LL RFT + F +TIG++F + + +D K+VK QIWDTAGQER+R ITSAYYRGA G +LVYD+T A+F NV W+R + +H N+ +L+GNK DL VS G+A A++ F ETSA Sbjct: 9 DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSA 158 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |