FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K VK QIWDTAGQER+R ITS+YYRGA G +VYDVT +F NV +WL+E+ + + +L+GNK+D+ V K FA+ + F+ETSA Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 E+D+ FK++LIGDSGVGKS LL RF + + STIGV+F ++L +D K +K QIWDTAGQER+R ITS+YYRGA G +LVYD T +F NV +W+ E+ + N+ +L+GNKTDL + V + K+FAE + F+ETSA Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37 Identity = 74/151 (49.01%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGR-WLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +EYDYLFK+++IGDSG GKS+LL RF N ++ STIGV+F ++++IDN +K QIWDTAGQER+R ITS YYRGA G + VYDVT +F ++ WL+++ ++ N+ +LIGNK DL V ++ K AEQ ++ ++E SA Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37 Identity = 71/148 (47.97%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + ++ F ETSA Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSA 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 77/149 (51.68%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R+ ++ K VK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ + + +L+GNK+D+ V K FA+ ++ F+ETSA Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 74/148 (50.00%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD L KL+LIGDSGVGKS LL RF +++F +TIG++F R++ I N+ VK Q+WDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W + ++ + + + ++L+GNK DL VSTE G+A A++ + F+E S+ Sbjct: 8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASS 155
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 75/149 (50.34%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 E+DYLFKL+LIGDS VGKS L RF + + STIGV+F R++ ++ K VK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV +WL E+ + + ++ +L+GNK DL AV T +A+A++ + F+ETSA Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 69/148 (46.62%), Postives = 103/148 (69.59%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E + A + + F ETSA Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 71/148 (47.97%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSA 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 71/148 (47.97%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSA 153 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |