FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 72/150 (48.00%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 + YD + K++LIGDSGVGKS LL RF +++FN +TIG++F +++ I+ K VK Q+WDTAGQER+R IT+AYYRGA+G +LVYDVT TF N+ +W + + EH + ++L+GNK+D+ V V+ + G+A A++ + F+E+SA Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRV-VTADQGEALAKELGIPFIESSA 163
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 256 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLY-FMETSA 708 DE DYLFK++LIGDS VGK+ ++ F ++ ++TIGV+F RSL ID K VK Q+WDTAGQER+R IT +YYR A A++ YD+TR +TF++V W+ E+ ++ N+++MLIGNK+DL V ED AE+ L +ETSA Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSA 162
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 69/148 (46.62%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E A + + F ETSA Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 69/148 (46.62%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD+LFKL+LIGDSGVGK+ L+ RF ++ FN STIG++F R++ I+ K +K Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +F+N+ W++ ++E+ + +L+GNK D+ V E A + + F ETSA Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSA 152
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 70/148 (47.30%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++ +++ + K +K QIWDTAGQER+ IT++YYRGA+G +LVYD+T +F+N+ +WLR + EH + ++ ML+GNK D+ V G+ A + + F ETSA Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSA 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36 Identity = 72/144 (50.00%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV ++ +A+AE SL FMETSA Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSA 165
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36 Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36 Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36 Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG++G GKS LL +F + +F +S TIGVEF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36 Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 244 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 G + EYD L K+++IGDSGVGKS +L RF N F STIGV+F R++ +D K +K QIWDTAGQER++ IT++YYRGA G ++VYD+T +F ++ RWL ++ P+++ +++GNK DL AV + K FA++ ++ METSA Sbjct: 23 GSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSA 177 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |