FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35 Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+S+ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ P+I++ L GNK DL + V E+ +A+A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 71/144 (49.31%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ PNI++ L GNK DL AV +D + +A+ SL FMETSA Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSA 165
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 71/144 (49.31%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+S+ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T TF W++EL+ P+I++ L GNK DL V E+ +A+A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG++G GKS LL +F + +F +S TIG+EF ++ + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NI+++L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35 Identity = 73/152 (48.03%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 256 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLY-FMETSA 708 DE +DYLFK++LIGDS VGK+ ++ F + ++TIGV+F R+L ID K VK Q+WDTAGQER+R IT +YYR A A++ YD+TR +TF++V W+ E+ ++ N+++MLIGNK DL V ED AE+ L +ETSA Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSA 162
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 164
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLVL+G+S VGKS+L+ RF K +F+ +STIG F T+++ +D+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +F W++EL+ PNI++ L GNK DL + AV ++ +++A+ SL FMETSA Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 164 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |