FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51 Identity = 95/156 (60.90%), Postives = 127/156 (81.41%), Query Frame = 1 Query: 244 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSAL Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSAL 157
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 3.825e-51 Identity = 96/156 (61.54%), Postives = 126/156 (80.77%), Query Frame = 1 Query: 244 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSAL Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSAL 157
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.996e-51 Identity = 96/156 (61.54%), Postives = 126/156 (80.77%), Query Frame = 1 Query: 244 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL V TE+ + FAE L F+ETSAL Sbjct: 2 GNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSAL 157
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50 Identity = 91/152 (59.87%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 256 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 +EE +YLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ IDNK + AQ WDTAGQER+RA+TS YYRGAVGA++VYD+T +F+NV RWL ELRE + +I++M++GNK+DL V T++ +AFAE + F+ETSAL Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSAL 155
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.377e-47 Identity = 86/150 (57.33%), Postives = 121/150 (80.67%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 EYDYL K+V+IGDSGVGKSNLLSR+ KNEF++ STIGVEF+T++L+IDNK++K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+ +WL++ RE+ + +ML+GNK+DL+ VST +GK FAE+ + F+ETSAL Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSAL 156
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.557e-44 Identity = 85/148 (57.43%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK DL H AV+TE+G+ FA++ L F+ETSA Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSA 150
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.557e-44 Identity = 85/148 (57.43%), Postives = 108/148 (72.97%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK DL H AV+TE+G+ FA++ L F+ETSA Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSA 150
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43 Identity = 84/148 (56.76%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +ML+GNK DL H AVS E+G+ FA++ L FME SA Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASA 150
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.248e-43 Identity = 84/148 (56.76%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +ML+GNK DL H AVS E+G+ FA++ L FME SA Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASA 150
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.834e-43 Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y+Y+FK ++IGD GVGKS LL +FT+N+F +S TIGVEF TR + ++NK +K QIWDTAGQER+RA+T +YYRGA GALLVYD+TR T+ ++ WL + R T+PN ++MLIGNK DL V+ E+ AFA+Q L F+E+SA Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSA 152 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |