FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLR-ELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +KLV++GD GVGKS L +F + F + TI + + IDN+ + DTAGQE + A+ Y R G L+VY VT A+F++V R+ + LR + ++L+ NK DL HL V+ + GK A + ++ ++ETSA Sbjct: 14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHT-EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSA 157
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLR-ELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +KLV++GD GVGKS L +F + F + TI + + IDN+ + DTAGQE + A+ Y R G L+VY VT A+F++V R+ + LR + ++L+ NK DL HL V+ + GK A + ++ ++ETSA Sbjct: 14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHT-EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSA 157
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII-VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 +KLV++G GVGKS L + T++ F E TI + + + ID++V I DTAGQE Y A+ Y R G LLVY +T ++ + + +++ D + + ++++GNK+DL + VS +DG A+Q + F+ETSA Sbjct: 11 YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYR-KQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 630 FK VL+GD G GK+ + R EF + +T+GVE + ++ +WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D++ Sbjct: 11 FKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIK 127
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 630 FKLVL+GD G GK+ + R EF +T+GVE + D ++ +WDTAGQE++ + YY ++++DVT T++NV W R+L + NI ++L GNK D++ Sbjct: 8 FKLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGVEVHPLNFATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCE-NIPIVLCGNKVDVK 124
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 630 FKLVL+GD G GK+ + R EF + +T+GVE + ++ +WDTAGQE++ + YY ++++DVT T++NV W R+L + NI ++L GNK D++ Sbjct: 8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYMATLGVEVHPLGFSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLTRVCE-NIPIVLCGNKVDVK 124 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |