FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: DJC27_DANRE (DnaJ homolog subfamily C member 27 OS=Danio rerio GN=dnajc27 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 42/148 (28.38%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 280 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD-----PNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 K++ +G++ VGKS ++ R+ + F + +TIG+++ +++ ++ +K I+D AG + + + +Y+ + G +LVYDV +F + WL E+++ NII ++ NK DL V +G+ +AE ++ ETSA Sbjct: 18 KVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVVDESEGRLWAESRGFHYFETSA 165
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16 Identity = 42/161 (26.09%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 250 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP--------NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 + D K++ +G++ VGKS ++ R+ + F + ++TIG+++ ++I ++ +K I+D AG + + + +Y+ G +LVYDV + +F+++ WL E+++ P NI+ + NK D V +G+ ++E + + ETSA Sbjct: 8 RKDSRKPLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLDNIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSA 168
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSJ (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. japonica GN=RAN3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKL+L+GD G GK+ + R EF + TIGVE V+ WDTAGQE++ + YY A++++DVT T++NV W +++ D NI ++L GNK D+++ + F +++L + E SA Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVCD-NIPIVLCGNKVDMKNRQVKAKM--VTFHRKKNLQYYEISA 158
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSI (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. indica GN=RAN3 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKL+L+GD G GK+ + R EF + TIGVE V+ WDTAGQE++ + YY A++++DVT T++NV W +++ D NI ++L GNK D+++ + F +++L + E SA Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVCD-NIPIVLCGNKVDMKNRQVKAKM--VTFHRKKNLQYYEISA 158
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 277 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT T++NV W R+L + NI ++L GNK D+++ + + F +++L + E SA Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISA 154 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |