FC932452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39 Identity = 78/150 (52.00%), Postives = 105/150 (70.00%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL-RHLVAVSTEDGKAFAEQESLYFMETSA 708 +YDYL KL+LIGDSGVGKS LL RF+ F +TIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++F N+ W+R + +H N+ +L+GNK D+ AV T G+A A++ + F ETSA Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSA 160
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39 Identity = 76/148 (51.35%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 YDYL KL+LIGDSGVGKS LL RF+++ F +TIG++F R++ ++ K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W+R + +H ++ MLIGNK D+ V + GK+ A++ + F+ETSA Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSA 159
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39 Identity = 77/148 (52.03%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 265 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 Y++LFK +++GDS VGKSNLL +F F S TIGVEF +RS+ I++K +K QIWDTAGQE++R+IT AYYRGAV A++VYD+TR +F+++ WL + R+ + ++ +LIGNK DL VST + K FAE+ L F ETSA Sbjct: 21 YEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSA 168
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNI+V+L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNI+V+L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNI+V+L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 259 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 711 E YD+LFK ++IG +G GKS LL +F +N+F +S TIGVEF +R + + K VK QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNI+V+L GNK DL V+ + FA++ L F+ETSAL Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSAL 153
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39 Identity = 81/157 (51.59%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 238 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 M+ PD YDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ + N+ +L+GNK+DL V K +A+Q + F+ETSA Sbjct: 1 MSTMNPD--YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSA 155
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.276e-38 Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSA 155
BLAST of FC932452 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38 Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 262 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 708 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSA 152 The following BLAST results are available for this feature:
BLAST of FC932452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932452 ID=FC932452; Name=FC932452; organism=Citrus clementina; type=EST; length=713bpback to top |