FC932456

Overview
NameFC932456
Unique NameFC932456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP2_MAIZE (Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=PEP4 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.215e-51
Identity = 107/225 (47.56%), Postives = 140/225 (62.22%), Query Frame = 1
Query:    4 FGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVC--DMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENTTV*GG*LR-ADSHISIL*IC 669
            FG      R L+ +T A L   M PP  P+ E WR L++E++ ++ + YRS V++ P F+ YF  ATP+ E G +NIGSRP++RK S GI  LRAIPW+FAWTQTRF LP WLG GA  K V   D+ N    +EMY EWPFF+ TIDL+EMV  K +  IA  YD++LVSE    LG +LR     T+K +L V+GH  L E        LR  D++I+ L +C
Sbjct:  677 FGEEHLCFRTLQRFTAATLEHGMHPPNAPKPE-WRALLDEMAVVATEEYRSIVFKEPRFVEYFRLATPETEYGRMNIGSRPSKRKPSGGIDSLRAIPWIFAWTQTRFHLPVWLGFGAAFKNVLQKDIRNLHMLQEMYNEWPFFRVTIDLVEMVFAKGNPGIAALYDKLLVSEELHPLGEKLRANYEETQKLLLQVAGHRDLLEGDLYLKQRLRLRDAYITTLNVC 900          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_TOLAT (Phosphoenolpyruvate carboxylase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.781e-51
Identity = 92/192 (47.92%), Postives = 131/192 (68.23%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVL 576
            KFGLP+ A+   ++YT+AVL A + PP  P E  W ++M+++S+ISCQ+YRS V + P+F+ YF  ATP+ ELG L +GSRP++RK + G+  LRAIPW+FAWTQ R +LP+WLG    L+ V D G  +  KEM ++WPFF + ++++EMV  KAD  +A+ YD  L  E+   LG  LR+EL  +   VL
Sbjct:  616 KFGLPEVAIHNFKLYTSAVLEANLLPPPKP-EAAWYDVMDKLSEISCQHYRSIVRDEPDFVPYFRAATPEMELGKLPLGSRPSKRKPNGGVESLRAIPWIFAWTQNRLMLPSWLGAHVALQAVMDEGKEDLLKEMDQQWPFFHTRLEMLEMVFLKADLWLAEYYDLRLAPENLWPLGKRLRQELQDSINVVL 806          

HSP 2 Score: 31.5722 bits (70), Expect = 7.781e-51
Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 3
Query:  618 LRRLIESRLPYLNPMNMLXVEILKRLRQDDDNHNSEM 728
            ++  I+ R PY +P+N+L VE+L R R   D  N ++
Sbjct:  822 IKESIKLRNPYTDPLNVLQVELLHRSRATPDEVNPQV 858          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP1_SACHY (Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Saccharum hybrid PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.423e-51
Identity = 108/225 (48.00%), Postives = 140/225 (62.22%), Query Frame = 1
Query:    4 FGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVC--DMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENTTV*GG*LR-ADSHISIL*IC 669
            FG      R L+ +T A L   M PP  P+ E WR LM+E++ ++ + YRS V+E P F+ YF  ATP+ E G +NIGSRP++RK S GI  LRAIPW+FAWTQTRF LP WLG GA  K V   D+ N +  +EMY +WPFF+ TIDL+EMV  K D  IA  YD++LVSE     G  LR     T++ +L V+GH+ L E        LR  DS+I+ L +C
Sbjct:  676 FGEEHLCFRTLQRFTAATLEHGMHPPISPKPE-WRALMDEMAIVATKEYRSIVFEEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSAGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVLDKDIRNLQTLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEDLWSFGKRLRANYEETKQLLLQVAGHKDLLEGDPYLKQRLRIRDSYITALNVC 899          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP2_SORBI (Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.231e-50
Identity = 106/225 (47.11%), Postives = 141/225 (62.67%), Query Frame = 1
Query:    4 FGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVC--DMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENTTV*GG*LR-ADSHISIL*IC 669
            FG    + R L+ +T A L   M PP  P+ E WR L++E++ ++ + YRS V++ P F+ YF  ATP+ E G +NIGSRP++RK S GI  LRAIPW+FAWTQTRF LP WLG G   K V   D+ N    +EMY EWPFF+ TIDL+EMV  K +  IA  YD++LVSE  + LG +LR     T+K +L V+GH  L E        LR  D++I+ L +C
Sbjct:  670 FGEEHLSFRTLQRFTAATLEHGMHPPNAPKPE-WRTLLDEMAVVATEEYRSIVFQEPRFVEYFRLATPETEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGGAFKHVLQKDIRNLHMLQEMYNEWPFFRVTIDLVEMVFAKGNPGIAALYDKLLVSEELRPLGEKLRANYEETQKLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVC 893          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SHESH (Phosphoenolpyruvate carboxylase OS=Shewanella sediminis (strain HAW-EB3) GN=ppc PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.723e-50
Identity = 96/204 (47.06%), Postives = 134/204 (65.69%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENT 612
            KFGLP+ AV+ L +YT+AV+ AT+ PP  P+ E WR  M+++++ S   YRS V + P+F+AYF  ATP+ ELG L +GSRP +R+   GI  LRAIPW+FAW+Q R +LPAWLG G  L+   D G     +EM ++WPFF++ I ++EMV  KA+ ++AK Y+  LV E+   LG  LR  L T  K VL ++    L E+T
Sbjct:  619 KFGLPKLAVQSLALYTSAVMEATLLPPPEPKPE-WRACMQKLAEESVDAYRSIVRDEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLRAIPWIFAWSQNRLMLPAWLGAGEALQAASDRGEMALLQEMEQDWPFFKTRISMLEMVYAKAEPNLAKYYETCLVPENLHHLGEALRTRLATGIKAVLELTQSNALMEHT 821          

HSP 2 Score: 28.8758 bits (63), Expect = 1.723e-50
Identity = 10/30 (33.33%), Postives = 20/30 (66.67%), Query Frame = 3
Query:  621 RRLIESRLPYLNPMNMLXVEILKRLRQDDD 710
            R  +  R PY++P+N +  E+L R R++++
Sbjct:  825 RESVTLRNPYIDPLNFVQAELLARTRKEEE 854          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SHELP (Phosphoenolpyruvate carboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ppc PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.723e-50
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENT 612
            KFGLP+ AV+ L +YT+AV+ AT+ PP  P+ E WR  ME ++  S   YR+ V E P+F+AYF  ATP+ ELG L +GSRP +R+   GI  LRAIPW+FAW+Q R +LPAWLG G  L+   D G     +EM ++WPFF++ I ++EMV  KA+ ++AK Y+  LV +    LG  LR  + T  K VL ++  + L  +T
Sbjct:  619 KFGLPKLAVQSLALYTSAVMEATLLPPPEPKPE-WREAMERLASDSVTAYRAIVREEPDFVAYFRAATPEVELGKLPLGSRPAKRRVDGGIESLRAIPWIFAWSQNRLMLPAWLGAGEALQQAADRGELTLLREMEQQWPFFETRISMLEMVYAKAEPNLAKYYETCLVPQELHHLGEALRSRMATGIKVVLELTQSDALMSHT 821          

HSP 2 Score: 30.8018 bits (68), Expect = 1.723e-50
Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 3
Query:  621 RRLIESRLPYLNPMNMLXVEILKRLRQD 704
            R  +E R PY++P+N L  E+L R R++
Sbjct:  825 RESVELRNPYIDPLNFLQAELLARTRKE 852          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SHEPA (Phosphoenolpyruvate carboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.974e-50
Identity = 93/204 (45.59%), Postives = 132/204 (64.71%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENT 612
            KFGLP+ AV+ L +YT+AV+ AT+ PP  P+ E WR  M++++  S   YR+ V E P+F++YF  ATP+ ELG L +GSRP +R+   GI  LRAIPW+FAW+Q R +LPAWLG G  LK   + G+    +EM K WPFF++ I ++EMV  KA+ +++K Y+  LV      LG +LR  L T  + VL ++  E L  +T
Sbjct:  619 KFGLPKLAVQSLALYTSAVMEATLLPPPEPKPE-WRQCMQQLADESVVAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAWSQNRLMLPAWLGAGEALKAASERGDLALLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKFYETSLVPSELHHLGVQLRERLATGVEAVLELTQAESLMAHT 821          

HSP 2 Score: 31.9574 bits (71), Expect = 4.974e-50
Identity = 12/31 (38.71%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  621 RRLIESRLPYLNPMNMLXVEILKRLRQDDDN 713
            R  +E R PY++P+N L  E+L R R+++ +
Sbjct:  825 RESVELRNPYIDPLNFLQAELLARTRREEQS 855          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP1_ARATH (Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana GN=PPC1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.977e-50
Identity = 105/225 (46.67%), Postives = 141/225 (62.67%), Query Frame = 1
Query:    4 FGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVC--DMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENTTV*GG*LR-ADSHISIL*IC 669
            FG      R L+ +T A L   MRPP  P+ E WR L++E++ ++ + YRS V++ P F+ YF  ATP+ E G +NIGSRP++RK S GI  LRAIPW+FAWTQTRF LP WLG G+ ++ V   D+ N    ++MY+ WPFF+ TIDLIEMV  K D  IA  YD++LVSE     G +LR     T+K +L  +GH+ L E        LR  DS+I+ L +C
Sbjct:  677 FGEEHLCFRTLQRFTAATLEHGMRPPISPKPE-WRALLDEMAVVATEEYRSVVFQEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAIRHVIEKDVRNLHMLQDMYQHWPFFRVTIDLIEMVFAKGDPGIAALYDKLLVSEELWPFGEKLRANFEETKKLILQTAGHKDLLEGDPYLKQRLRLRDSYITTLNVC 900          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SHEHH (Phosphoenolpyruvate carboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ppc PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.435e-49
Identity = 92/204 (45.10%), Postives = 133/204 (65.20%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSENT 612
            KFGLP+ AV+ L +YT+AV+ AT+ PP  P+ E WR  M+++++ S   YR+ V E P+F++YF  ATP+ ELG L +GSRP +R+   GI  LRAIPW+FAW+Q R +LPAWLG G  LK   + G+    +EM K WPFF++ I ++EMV  KA+ +++K Y+  LV +    LG +LR  L    + VL ++  E L  +T
Sbjct:  619 KFGLPKLAVQSLALYTSAVMEATLLPPPEPKPE-WRQCMQQLAEESVLAYRAIVREEPDFVSYFRAATPEIELGKLPLGSRPAKRRVDGGIESLRAIPWIFAWSQNRLMLPAWLGAGEALKAASERGDLPLLQEMEKHWPFFKTRISMLEMVYAKAEPNLSKFYETSLVPKELHHLGVQLRERLAIGIEAVLELTQAESLMAHT 821          

HSP 2 Score: 31.9574 bits (71), Expect = 1.435e-49
Identity = 12/31 (38.71%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  621 RRLIESRLPYLNPMNMLXVEILKRLRQDDDN 713
            R  +E R PY++P+N L  E+L R R+++ +
Sbjct:  825 RESVELRNPYIDPLNFLQAELLARTRREEQS 855          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP3_SORBI (Phosphoenolpyruvate carboxylase 3 OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.870e-49
Identity = 95/203 (46.80%), Postives = 131/203 (64.53%), Query Frame = 1
Query:    4 FGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVC--DMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSE 606
            FG      + L+ +T A L   M PP  P+ E WR LMEE++ ++ + YRS V + P F+ YF  ATP+ E G +NIGSRP +R+   GI  LRAIPW+F+WTQTRF LP WLG+GA  K     D+ N +  KEMY EWPFF+ T+DL+EMV  K D  IA  YDE+LV+E  +  G +LR + + T++ +L ++GH+ + E
Sbjct:  672 FGEENLCFQSLQRFTAATLEHGMHPPVSPKPE-WRKLMEEMAVVATEEYRSVVVKEPRFVEYFRSATPETEYGKMNIGSRPAKRRPGGGITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKWAIDKDIKNFQKLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILE 873          

HSP 2 Score: 22.3274 bits (46), Expect = 1.870e-49
Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = 3
Query:  618 LRRLIESRLPYLNPMNMLXVEILKRLR 698
            L++ +  R PY+  +N+     LKR+R
Sbjct:  878 LKQGLRLRNPYITTLNVFQAYTLKRIR 904          
The following BLAST results are available for this feature:
BLAST of FC932456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP2_MAIZE7.215e-5147.56Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=P... [more]
CAPP_TOLAT7.781e-5147.92Phosphoenolpyruvate carboxylase OS=Tolumonas auens... [more]
CAPP1_SACHY9.423e-5148.00Phosphoenolpyruvate carboxylase, housekeeping isoz... [more]
CAPP2_SORBI1.231e-5047.11Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicol... [more]
CAPP_SHESH1.723e-5047.06Phosphoenolpyruvate carboxylase OS=Shewanella sedi... [more]
CAPP_SHELP1.723e-5046.08Phosphoenolpyruvate carboxylase OS=Shewanella loih... [more]
CAPP_SHEPA4.974e-5045.59Phosphoenolpyruvate carboxylase OS=Shewanella peal... [more]
CAPP1_ARATH7.977e-5046.67Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis t... [more]
CAPP_SHEHH1.435e-4945.10Phosphoenolpyruvate carboxylase OS=Shewanella hali... [more]
CAPP3_SORBI1.870e-4946.80Phosphoenolpyruvate carboxylase 3 OS=Sorghum bicol... [more]

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Properties
Property NameValue
Genbank descriptionC34208G08EF PostHarveN Citrus clementina cDNA clone C34208G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932456 ID=FC932456; Name=FC932456; organism=Citrus clementina; type=EST; length=750bp
AAGTTTGGGTTGCCACAGACAGCTGTTAGACAGCTAGAGATATACACAAC
TGCTGTGCTGCTTGCAACCATGCGACCTCCTCAACCTCCTCGAGAAGAAA
AATGGCGTAATCTCATGGAGGAGATCTCAAAAATTAGTTGCCAGAATTAC
CGGAGCACAGTCTATGAAAACCCAGAATTCCTTGCCTACTTCAACGAGGC
TACACCCCAGGCTGAACTAGGGTACCTTAATATAGGAAGCCGCCCCACAA
GAAGAAAGAGCTCAACAGGAATTGGCCATCTTCGAGCCATTCCATGGGTA
TTTGCATGGACCCAGACCAGGTTTGTCCTTCCAGCTTGGCTTGGAATCGG
AGCAGGGCTGAAGGGTGTTTGTGACATGGGAAATACTGAAGACTGGAAAG
AAATGTATAAAGAATGGCCCTTTTTCCAGTCTACCATAGATCTTATAGAG
ATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGATGAAGT
CCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGC
TCTTAACAACTGAGAAGTTCGTACTTGTGGTTAGTGGGCATGAGAAGCTA
TCTGAGAATACCACAGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATAT
CTCAATCCTATGAATATGTTGCANGTGGAGATACTGAAGAGATTGAGACA
GGATGATGATAACCATAACTCAGAGATGCATTGCTCATCACTATAAATGG
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