FC932456

Overview
NameFC932456
Unique NameFC932456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_HAEIN (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae GN=ppc PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.008e-44
Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K GLP  AV   ++Y +A+L A + PP  P+ E WR +M+E+S ISC  YR  V  + +F+ YF  ATP+ EL  L +GSRP +R  + G+  LRAIPW+FAW Q R +LPAWLG GA ++ V + G  +   +M + WPFF + I ++EMV  K+DT ++++YD+ LV +    LG  LR++L    + VL +S   +L
Sbjct:  619 KLGLPAVAVETFDLYASAILEANLLPPPEPKPE-WRTIMDELSTISCDIYRGVVRGDKDFVPYFRSATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAWMQNRLMLPAWLGAGAAIRQVIEQGKGDIIHKMCENWPFFSTRIGMLEMVFSKSDTWLSQQYDQRLVKKELWYLGENLRKQLEDDIQTVLSLSHQSEL 817          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_HAEI8 (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain 86-028NP) GN=ppc PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.008e-44
Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K GLP  AV   ++Y +A+L A + PP  P+ E WR +M+E+S ISC  YR  V  + +F+ YF  ATP+ EL  L +GSRP +R  + G+  LRAIPW+FAW Q R +LPAWLG GA ++ V + G  +   +M + WPFF + I ++EMV  K+DT ++++YD+ LV +    LG  LR++L    + VL +S   +L
Sbjct:  619 KLGLPAVAVETFDLYASAILEANLLPPPEPKPE-WRTIMDELSTISCDIYRGVVRGDKDFVPYFRSATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAWMQNRLMLPAWLGAGAAIRQVIEQGKGDIIHKMCENWPFFSTRIGMLEMVFSKSDTWLSQQYDQRLVKKELWYLGENLRKQLEDDIQTVLSLSHQSEL 817          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_CHRSD (Phosphoenolpyruvate carboxylase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ppc PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.611e-42
Identity = 93/206 (45.15%), Postives = 124/206 (60.19%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCD-MGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSE-SRQELGAELRRELLTTEKFVLVVSGHEKLSENT 612
            KFG P  A+R +EIY  AVL AT+ PP  P E  WR  M+ +S I+ + Y   V E+P+F+ YF   TP++ LG L +GSRP +R+   G+  LRAIPW+FAWTQTR +LPAWLG G       D  G  E  ++M   WPFF + +D++EM+L KAD  IA  Y+  LV E + Q LG  LR  L   E  +L +   + L E+T
Sbjct:  621 KFGQPDIALRSMEIYACAVLEATLLPPPDP-EPVWREEMDRLSDIAHRAYVGVVREDPDFVPYFRSVTPESALGRLPLGSRPAKRRQEGGVESLRAIPWIFAWTQTRLMLPAWLGSGEAFATRLDEPGGRERLRDMRARWPFFGTYLDMLEMLLAKADPDIAAYYERRLVDEPALQALGKSLRERLSRLETVLLDILDQDTLLEHT 825          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_PSEAE (Phosphoenolpyruvate carboxylase OS=Pseudomonas aeruginosa GN=ppc PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 92/200 (46.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            KFGLP  A + L +Y  AVL AT+ PP  P E  WR  M+ ++K +   YR  V ++P+F+ YF  ATP+ ELG L +GSRP +R+   G+  LRAIPW+FAWTQTR +LPAWLG    L    + G      +M ++WPFF + ID++EMVL KAD  IA+ YDE LV    + LG  LR  L    + VL ++G   L
Sbjct:  619 KFGLPDIAEQNLNLYLAAVLEATLMPPPAP-EPAWRAQMDRLAKDALLAYRRVVRDDPQFVEYFRLATPEQELGRLPLGSRPAKRREG-GVESLRAIPWIFAWTQTRLMLPAWLGWETALLNAIERGEGALLGQMREQWPFFTTRIDMLEMVLAKADADIARLYDERLVPLELRPLGRRLRDLLSQAVRVVLGLTGQSLL 816          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_PSEA7 (Phosphoenolpyruvate carboxylase OS=Pseudomonas aeruginosa (strain PA7) GN=ppc PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 92/200 (46.00%), Postives = 121/200 (60.50%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            KFGLP  A + L +Y  AVL AT+ PP  P E  WR  M+ ++K +   YR  V ++P+F+ YF  ATP+ ELG L +GSRP +R+   G+  LRAIPW+FAWTQTR +LPAWLG    L    + G      +M + WPFF + ID++EMVL KAD  IA+ YDE LV    + LG  LR  L    + VL ++G   L
Sbjct:  619 KFGLPDIAEQNLNLYLAAVLEATLMPPPAP-EPAWRAQMDRLAKDALHAYRRVVRDDPQFVEYFRLATPEQELGRLPLGSRPAKRREG-GVESLRAIPWIFAWTQTRLMLPAWLGWETALLNAIERGEGALLGQMRERWPFFTTRIDMLEMVLAKADADIARLYDERLVPLELRPLGRRLRDLLSQAVRVVLGLTGQSLL 816          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_THEVL (Phosphoenolpyruvate carboxylase OS=Thermosynechococcus vulcanus GN=ppc PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.735e-41
Identity = 86/207 (41.55%), Postives = 118/207 (57.00%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTED---WKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE----LGAELRRELLTTEKFVLVVSGHEKL 600
            K+ LP+ A+  LE   TAV+ A++        E W  +MEE++  S Q YR  +YE PEF+ +FNE TP  E+  L I SRPTRR     +  LRAIPWVF+WTQTRF+LPAW G+G  LK   +    E     +  Y +WPFF+  I  +EM L K D  IA+ Y + L     +E    L  ++ +E   T + VL ++GHE+L
Sbjct:  732 KYSLPELALFNLETVATAVIQASLLRSSIDEIEPWHEIMEELATRSRQCYRHLIYEQPEFIEFFNEVTPIQEISQLQISSRPTRRGGKKTLESLRAIPWVFSWTQTRFLLPAWYGVGTALKEFLEEKPAEHLSLLRYFYYKWPFFRMVISKVEMTLAKVDLEIARYYVQELSQPQNREAFCRLYDQIAQEYRLTTELVLTITGHERL 938          

HSP 2 Score: 27.7202 bits (60), Expect = 2.735e-41
Identity = 15/37 (40.54%), Postives = 23/37 (62.16%), Query Frame = 3
Query:  615 SLRRLIESRLPYLNPMNMLXVEILKRLRQDDDNHNSE 725
            +L+R ++ R   + P+  L V +LKRLRQ    HNS+
Sbjct:  944 ALQRSVQLRNRTIVPLGFLQVSLLKRLRQ----HNSQ 976          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_THEEB (Phosphoenolpyruvate carboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=ppc PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.735e-41
Identity = 86/207 (41.55%), Postives = 118/207 (57.00%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTED---WKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE----LGAELRRELLTTEKFVLVVSGHEKL 600
            K+ LP+ A+  LE   TAV+ A++        E W  +MEE++  S Q YR  +YE PEF+ +FNE TP  E+  L I SRPTRR     +  LRAIPWVF+WTQTRF+LPAW G+G  LK   +    E     +  Y +WPFF+  I  +EM L K D  IA+ Y + L     +E    L  ++ +E   T + VL ++GHE+L
Sbjct:  732 KYSLPELALFNLETVATAVIQASLLRSSIDEIEPWHEIMEELATRSRQCYRHLIYEQPEFIEFFNEVTPIQEISQLQISSRPTRRGGKKTLESLRAIPWVFSWTQTRFLLPAWYGVGTALKEFLEEKPAEHLSLLRYFYYKWPFFRMVISKVEMTLAKVDLEIARYYVQELSQPQNREAFCRLYDQIAQEYRLTTELVLTITGHERL 938          

HSP 2 Score: 27.7202 bits (60), Expect = 2.735e-41
Identity = 15/37 (40.54%), Postives = 23/37 (62.16%), Query Frame = 3
Query:  615 SLRRLIESRLPYLNPMNMLXVEILKRLRQDDDNHNSE 725
            +L+R ++ R   + P+  L V +LKRLRQ    HNS+
Sbjct:  944 ALQRSVQLRNRTIVPLGFLQVSLLKRLRQ----HNSQ 976          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ROSCS (Phosphoenolpyruvate carboxylase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=ppc PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 9.229e-39
Identity = 83/218 (38.07%), Postives = 119/218 (54.59%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTED-----------WKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSE-SRQELGAELRRELLTTEKFVLVVSGHEKLSENTTV 618
            ++GLP  A R +E    AVL A +     P +E W   +E ++ +S ++YR+ VYE  +F+ YF   TP AE+  LNIGSRP  R+++  I  LRAIPWVF+W Q+R  LP W G+G  L+     G   D            +EMY  W FF+  ID  +M+LGKAD HIA RY E+   + +   + A +R E     + +  V+  E+L +N  V
Sbjct:  665 RYGLPLLAHRHIEQVINAVLRAGLLQRDDPPDE-WTQALERLAALSQRHYRALVYERSDFVPYFRNVTPIAEISRLNIGSRPASRRNTERIEDLRAIPWVFSWMQSRHTLPGWYGLGFALETFVYAGEQSDASGSAIDRLALLQEMYARWSFFRVMIDNAQMILGKADLHIASRYAELAPDQNAAAAIFAAIREEYQRASRMIRQVARIERLLDNAPV 881          

HSP 2 Score: 33.113 bits (74), Expect = 9.229e-39
Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  618 LRRLIESRLPYLNPMNMLXVEILKRLRQDDD 710
            L+  I+ R PY++PM+ L +E+L+RLR   D
Sbjct:  882 LQHSIQRRNPYIDPMSYLQIELLRRLRAAPD 912          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_STRP3 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M3 GN=ppc PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.567e-38
Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVL--LATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCD--MGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSEN 609
            K+G    A   LE+  +A +  + T     P   + +R +M+ I   S   YR  V++NP F  YF EA+P  E+  LNIGSRP  RK+ T I  LRAIPWVF+W+Q R + P W G+G+  K   D   GN E  + MY+ WPFF S +  ++MVL K++ +IA +Y ++  S+  +++  E+  E   T+  +L +  H+ L E+
Sbjct:  657 KYGNKDVAYYHLEMLISASINRMVTQMITDPNEIDSFREIMDSIVADSNTIYRKLVFDNPHFYDYFFEASPIKEVSSLNIGSRPAARKTITEITGLRAIPWVFSWSQNRIMFPGWYGVGSAFKRYIDRAQGNLERLQHMYQTWPFFHSLLSNVDMVLSKSNMNIAFQYAQLAESQDVRDVFYEILDEWQLTKNVILAIQDHDDLLED 863          

HSP 2 Score: 36.965 bits (84), Expect = 1.567e-38
Identity = 15/37 (40.54%), Postives = 25/37 (67.57%), Query Frame = 3
Query:  615 SLRRLIESRLPYLNPMNMLXVEILKRLRQDDDNHNSE 725
            SL+  ++SRLPY N +N + +E++KR R +  + N E
Sbjct:  866 SLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDE 902          
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_STRPG (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=ppc PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.659e-38
Identity = 77/207 (37.20%), Postives = 117/207 (56.52%), Query Frame = 1
Query:    1 KFGLPQTAVRQLEIYTTAVL--LATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCD--MGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKLSEN 609
            K+G    A   LE+  +A +  + T     P   + +R +M+ I   S   YR  V++NP F  YF EA+P  E+  LNIGSRP  RK+ T I  LRAIPWVF+W+Q R + P W G+G+  K   D   GN E  + MY+ WPFF S +  ++MVL K++ +IA +Y ++  S+  +++  E+  E   T+  +L +  H+ L E+
Sbjct:  657 KYGNKDVAYYHLEMLISASINRMVTQMITDPNEIDSFREIMDSIVADSNIIYRKLVFDNPHFYDYFFEASPIKEVSSLNIGSRPAARKTITEITGLRAIPWVFSWSQNRIMFPGWYGVGSAFKRYIDRAQGNLERLQHMYQTWPFFHSLLSNVDMVLSKSNMNIAFQYAQLAESQDVRDVFYEILDEWQLTKNVILAIQDHDDLLED 863          

HSP 2 Score: 36.965 bits (84), Expect = 2.659e-38
Identity = 15/37 (40.54%), Postives = 25/37 (67.57%), Query Frame = 3
Query:  615 SLRRLIESRLPYLNPMNMLXVEILKRLRQDDDNHNSE 725
            SL+  ++SRLPY N +N + +E++KR R +  + N E
Sbjct:  866 SLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDE 902          
The following BLAST results are available for this feature:
BLAST of FC932456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_HAEIN5.008e-4443.00Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP_HAEI85.008e-4443.00Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP_CHRSD1.611e-4245.15Phosphoenolpyruvate carboxylase OS=Chromohalobacte... [more]
CAPP_PSEAE2.748e-4246.00Phosphoenolpyruvate carboxylase OS=Pseudomonas aer... [more]
CAPP_PSEA72.748e-4246.00Phosphoenolpyruvate carboxylase OS=Pseudomonas aer... [more]
CAPP_THEVL2.735e-4141.55Phosphoenolpyruvate carboxylase OS=Thermosynechoco... [more]
CAPP_THEEB2.735e-4141.55Phosphoenolpyruvate carboxylase OS=Thermosynechoco... [more]
CAPP_ROSCS9.229e-3938.07Phosphoenolpyruvate carboxylase OS=Roseiflexus cas... [more]
CAPP_STRP31.567e-3837.20Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_STRPG2.659e-3837.20Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC34208G08EF PostHarveN Citrus clementina cDNA clone C34208G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932456 ID=FC932456; Name=FC932456; organism=Citrus clementina; type=EST; length=750bp
AAGTTTGGGTTGCCACAGACAGCTGTTAGACAGCTAGAGATATACACAAC
TGCTGTGCTGCTTGCAACCATGCGACCTCCTCAACCTCCTCGAGAAGAAA
AATGGCGTAATCTCATGGAGGAGATCTCAAAAATTAGTTGCCAGAATTAC
CGGAGCACAGTCTATGAAAACCCAGAATTCCTTGCCTACTTCAACGAGGC
TACACCCCAGGCTGAACTAGGGTACCTTAATATAGGAAGCCGCCCCACAA
GAAGAAAGAGCTCAACAGGAATTGGCCATCTTCGAGCCATTCCATGGGTA
TTTGCATGGACCCAGACCAGGTTTGTCCTTCCAGCTTGGCTTGGAATCGG
AGCAGGGCTGAAGGGTGTTTGTGACATGGGAAATACTGAAGACTGGAAAG
AAATGTATAAAGAATGGCCCTTTTTCCAGTCTACCATAGATCTTATAGAG
ATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGATGAAGT
CCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGC
TCTTAACAACTGAGAAGTTCGTACTTGTGGTTAGTGGGCATGAGAAGCTA
TCTGAGAATACCACAGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATAT
CTCAATCCTATGAATATGTTGCANGTGGAGATACTGAAGAGATTGAGACA
GGATGATGATAACCATAACTCAGAGATGCATTGCTCATCACTATAAATGG
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