FC932456

Overview
NameFC932456
Unique NameFC932456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALNS (Phosphoenolpyruvate carboxylase OS=Salmonella newport (strain SL254) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALHS (Phosphoenolpyruvate carboxylase OS=Salmonella heidelberg (strain SL476) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALG2 (Phosphoenolpyruvate carboxylase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALEP (Phosphoenolpyruvate carboxylase OS=Salmonella enteritidis PT4 (strain P125109) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALDC (Phosphoenolpyruvate carboxylase OS=Salmonella dublin (strain CT_02021853) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALCH (Phosphoenolpyruvate carboxylase OS=Salmonella choleraesuis GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_SALAR (Phosphoenolpyruvate carboxylase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 91/200 (45.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT+A+L A + PP  P++  WR++M+E+S ISC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L
Sbjct:  620 KYGLPEVTVSSLSLYTSAILEANLLPPPEPKDS-WRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_PSE14 (Phosphoenolpyruvate carboxylase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.716e-48
Identity = 98/200 (49.00%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            KFGLP  A + L +Y  AVL AT+ PP PP +  WR +M++++      YR+ V ENPEF+ YF +ATP+ ELG L +GSRP +R+   G+  LRAIPW+FAWTQTR +LPAWLG  A L    + G      +M ++WPFF++ ID++EMVL KAD+ IA+ YDE LVS   Q LGA LR  L      VL ++G ++L
Sbjct:  619 KFGLPDIAEQNLNLYLAAVLEATLLPPPPP-QPSWRTMMDQMAADGVGAYRAVVRENPEFVEYFRQATPEQELGRLPLGSRPAKRREG-GVESLRAIPWIFAWTQTRLMLPAWLGWEAALSKALERGEGTVLAQMREQWPFFRTRIDMLEMVLAKADSDIARLYDERLVSAELQHLGAHLRDLLSQACNVVLGLTGQKQL 816
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_KLEP3 (Phosphoenolpyruvate carboxylase OS=Klebsiella pneumoniae (strain 342) GN=ppc PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.716e-48
Identity = 90/200 (45.00%), Postives = 129/200 (64.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  +  L +YT+A+L A + PP  P+ E WR++M E+S +SC+ YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG GA L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV      LG ELR+ L      VL ++    L
Sbjct:  620 KYGLPEVTISSLSLYTSAILEANLLPPPEPKAE-WRDIMAELSDVSCKMYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGAALQKVVEGGKQSELEAMCRDWPFFSTRLGMLEMVYSKADLWLAEYYDQRLVKPELWALGTELRKLLAADINVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_HAES2 (Phosphoenolpyruvate carboxylase OS=Haemophilus somnus (strain 2336) GN=ppc PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 5.860e-48
Identity = 88/200 (44.00%), Postives = 123/200 (61.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K GLP  AV   ++Y +A+L A + PP  P+E  WR +M E+S  SC  YRS V  + +F+ YF  ATP+ EL  L +GSRP++R  + G+  LRAIPW+FAW Q R +LPAWLG  A ++   + GN E  +EM K WPFF + I ++EMV  K DT +++ YD  LV +    LG  LR +L    K +L +S  ++L
Sbjct:  619 KLGLPAVAVNSFDLYASAILEANLLPPPEPKES-WRAIMNELSDSSCNIYRSVVRGDKDFVPYFRSATPEQELSKLPLGSRPSKRNPNGGVESLRAIPWIFAWMQNRLMLPAWLGASASIRQSIEKGNKETIEEMCKNWPFFSTRIGMLEMVFSKTDTWLSEHYDLNLVKKELWYLGQSLREQLQADIKTILSLSHEDEL 817

HSP 2 Score: 33.113 bits (74), Expect = 5.860e-48
Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 
Query:  648 YLNPMNMLXVEILKRLRQDDDNHNSEM 728
            Y +P+N+L VE+L+RLR++ +N N ++
Sbjct:  834 YTDPLNLLQVELLRRLRENPENPNPDV 860
The following BLAST results are available for this feature:
BLAST of FC932456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_SALNS4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella newp... [more]
CAPP_SALHS4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella heid... [more]
CAPP_SALG24.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella gall... [more]
CAPP_SALEP4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella ente... [more]
CAPP_SALDC4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella dubl... [more]
CAPP_SALCH4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella chol... [more]
CAPP_SALAR4.377e-4845.50Phosphoenolpyruvate carboxylase OS=Salmonella ariz... [more]
CAPP_PSE145.716e-4849.00Phosphoenolpyruvate carboxylase OS=Pseudomonas syr... [more]
CAPP_KLEP35.716e-4845.00Phosphoenolpyruvate carboxylase OS=Klebsiella pneu... [more]
CAPP_HAES25.860e-4844.00Phosphoenolpyruvate carboxylase OS=Haemophilus som... [more]

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Properties
Property NameValue
Genbank descriptionC34208G08EF PostHarveN Citrus clementina cDNA clone C34208G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932456 ID=FC932456; Name=FC932456; organism=Citrus clementina; type=EST; length=750bp
AAGTTTGGGTTGCCACAGACAGCTGTTAGACAGCTAGAGATATACACAAC
TGCTGTGCTGCTTGCAACCATGCGACCTCCTCAACCTCCTCGAGAAGAAA
AATGGCGTAATCTCATGGAGGAGATCTCAAAAATTAGTTGCCAGAATTAC
CGGAGCACAGTCTATGAAAACCCAGAATTCCTTGCCTACTTCAACGAGGC
TACACCCCAGGCTGAACTAGGGTACCTTAATATAGGAAGCCGCCCCACAA
GAAGAAAGAGCTCAACAGGAATTGGCCATCTTCGAGCCATTCCATGGGTA
TTTGCATGGACCCAGACCAGGTTTGTCCTTCCAGCTTGGCTTGGAATCGG
AGCAGGGCTGAAGGGTGTTTGTGACATGGGAAATACTGAAGACTGGAAAG
AAATGTATAAAGAATGGCCCTTTTTCCAGTCTACCATAGATCTTATAGAG
ATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGATGAAGT
CCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGC
TCTTAACAACTGAGAAGTTCGTACTTGTGGTTAGTGGGCATGAGAAGCTA
TCTGAGAATACCACAGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATAT
CTCAATCCTATGAATATGTTGCANGTGGAGATACTGAAGAGATTGAGACA
GGATGATGATAACCATAACTCAGAGATGCATTGCTCATCACTATAAATGG
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