FC932456

Overview
NameFC932456
Unique NameFC932456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOLC (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOL6 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O6 GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOL5 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOK1 (Phosphoenolpyruvate carboxylase OS=Escherichia coli O1:K1 / APEC GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQNELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOHS (Phosphoenolpyruvate carboxylase OS=Escherichia coli O9:H4 (strain HS) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECODH (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 / DH10B) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECOBW (Phosphoenolpyruvate carboxylase OS=Escherichia coli (strain K12 / BW2952) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECO8A (Phosphoenolpyruvate carboxylase OS=Escherichia coli O8 (strain IAI1) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECO7I (Phosphoenolpyruvate carboxylase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHL 818
[Close]
BLAST of FC932456 vs. ExPASy Swiss-Prot
Match: CAPP_ECO5E (Phosphoenolpyruvate carboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ppc PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.320e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 KFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFNEATPQAELGYLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGVCDMGNTEDWKEMYKEWPFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKFVLVVSGHEKL 600
            K+GLP+  V  L +YT A+L A + PP  P+E  WR +M+E+S ISC  YR  V EN +F+ YF  ATP+ ELG L +GSRP +R+ + G+  LRAIPW+FAWTQ R +LPAWLG G  L+ V + G   + + M ++WPFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L
Sbjct:  620 KYGLPEITVSSLSLYTGAILEANLLPPPEPKES-WRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKTLWPLGKELRNLQEEDIKVVLAIANDSHL 818
The following BLAST results are available for this feature:
BLAST of FC932456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CAPP_ECOLC6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOL66.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOL56.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOK16.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOHS6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECODH6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECOBW6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECO8A6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECO7I6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]
CAPP_ECO5E6.320e-4745.50Phosphoenolpyruvate carboxylase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionC34208G08EF PostHarveN Citrus clementina cDNA clone C34208G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932456 ID=FC932456; Name=FC932456; organism=Citrus clementina; type=EST; length=750bp
AAGTTTGGGTTGCCACAGACAGCTGTTAGACAGCTAGAGATATACACAAC
TGCTGTGCTGCTTGCAACCATGCGACCTCCTCAACCTCCTCGAGAAGAAA
AATGGCGTAATCTCATGGAGGAGATCTCAAAAATTAGTTGCCAGAATTAC
CGGAGCACAGTCTATGAAAACCCAGAATTCCTTGCCTACTTCAACGAGGC
TACACCCCAGGCTGAACTAGGGTACCTTAATATAGGAAGCCGCCCCACAA
GAAGAAAGAGCTCAACAGGAATTGGCCATCTTCGAGCCATTCCATGGGTA
TTTGCATGGACCCAGACCAGGTTTGTCCTTCCAGCTTGGCTTGGAATCGG
AGCAGGGCTGAAGGGTGTTTGTGACATGGGAAATACTGAAGACTGGAAAG
AAATGTATAAAGAATGGCCCTTTTTCCAGTCTACCATAGATCTTATAGAG
ATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGATGAAGT
CCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGC
TCTTAACAACTGAGAAGTTCGTACTTGTGGTTAGTGGGCATGAGAAGCTA
TCTGAGAATACCACAGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATAT
CTCAATCCTATGAATATGTTGCANGTGGAGATACTGAAGAGATTGAGACA
GGATGATGATAACCATAACTCAGAGATGCATTGCTCATCACTATAAATGG
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