FC932461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.596e-63 Identity = 112/173 (64.74%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +VEM GDEMTR+ W+ IK+KLIFP++ELD+ +DLG+ NRDAT+D+VT ++AEA K+NV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ G KPI IGRHA+GDQYRATD V+ GPGK+++ + P +K V+NF GGVA+ M Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGM 182
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.390e-63 Identity = 112/173 (64.74%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ G KPI IGRHA+GDQYRATD V+ GPGK+++ F P+ +K V++F GGVA+ M Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGM 182
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 117/190 (61.58%), Postives = 145/190 (76.32%), Query Frame = 3 Query: 156 TKKKMAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD--EKTELEVYNFTGEGGVALSM 719 T + AF KIKV P+VE+DGDEMTR+ W IK KLI P+L++D+KY+DL + +RDAT DK+T ++AEA KY V IKCATITPDEARVKEF L +MWKSPNGTIRNIL GTVFREPI+ +PRL+P KPI IGRHA GDQY+ATDT+I GPG L+LV+ P + L+VY++ G GVA++M Sbjct: 11 TSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTLKVYDYKG-SGVAMAM 199
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ G KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ M Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGM 182
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ G KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ M Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGTQKVTYMVHDFEEGGGVAMGM 182
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.552e-63 Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 3 Query: 201 IVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +VEM GDEMTR+ W+ IK+KLI P++ELD+ +DLG+ NRDAT+D+VT ++AEA KYNV +KCATITPDE RV+EF LKQMWKSPNGTIRNIL GTVFRE IICKN+PRL+ G KPI IGRHA+GDQYRATD V+ GPGK+++ + P+ +K V++F GGVA+ M Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGM 182
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.206e-60 Identity = 110/180 (61.11%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PG TKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L M Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGM 185
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.206e-60 Identity = 110/180 (61.11%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 KIKV+ P+VE+DGDEMTRV WK IKD LI P+L++ + Y+DLG+ +RDATDD+VT+++A A K+ V +KCATITPDEARV+EF LK+MW SPNGTIRNIL GT+FREPI+ NVPRL+PG TKPI IGRHAFGDQYRAT+ + PG + L F P E+ + +GGV L M Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGM 185
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.128e-58 Identity = 107/180 (59.44%), Postives = 139/180 (77.22%), Query Frame = 3 Query: 180 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 KIKV NP+VE+DGDEMTR+ W+ I+++LI P+L++D+KY+DL + RD T D++T+++A A +Y V +KCATITPDEARV+EF LK+MWKSPNGTIRNIL G VFREPI+ KNVPRL+PG T PI +GRHAFGDQY+ATD + G G L + +V E+ E EV+ F GVA+ M Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKVPGAGTLTMKWVGT-NGEELEYEVFEFP-SAGVAMGM 180
BLAST of FC932461 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.925e-58 Identity = 107/181 (59.12%), Postives = 136/181 (75.14%), Query Frame = 3 Query: 177 QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGRTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALSM 719 +KI V+NP+ + GDE TRV W I+ KLIFPFL+L ++ +DLG+ RD T+D+VT+++A A + V IKCATITPDEARV EF LK+MWKSPNGTIRN L GT+FREPI+CKNVPRL+ K I IGRHAFGDQYRATD V++G GKL+L + P + +V++F +GGVAL M Sbjct: 3 EKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTEFGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVKGAGKLELTYTPADGSAPQKFQVFDFPSDGGVALGM 183 The following BLAST results are available for this feature:
BLAST of FC932461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932461 ID=FC932461; Name=FC932461; organism=Citrus clementina; type=EST; length=719bpback to top |