FC932475

Overview
NameFC932475
Unique NameFC932475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PENCI (Phosphoglycerate kinase OS=Penicillium citrinum GN=PGKA PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 3 
Query:  378 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            ++  DLKGK+V +R D NVPLD+N+N+T+  RI  A+PTIK+ I NGAK V+L SHLGRP G V PK+SL P+VP L +LLG  V  A+DC+GP+ E+ V    +  V+L
Sbjct:    9 VTDVDLKGKRVLIRVDFNVPLDENKNVTNPQRIVGALPTIKYAIDNGAKAVVLMSHLGRPDGKVNPKYSLKPVVPVLEKLLGKSVTFAEDCVGPQTEETVNKASDGQVIL 118
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_GEOSM (Phosphoglycerate kinase OS=Geobacter sp. (strain M21) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 3 
Query:  390 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            +L GKK+F+R D NVPLDDNQNIT+DTRIRA +P+I + +   AK+IL+SHLGRPKG    K+S+AP   RLS LLG +V  A DCIG EV+ ++ ++    V++
Sbjct:   11 NLSGKKLFMRVDFNVPLDDNQNITEDTRIRAVLPSINYALDQKAKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIM 115
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25
Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++LI+ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLIEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_GEOUR (Phosphoglycerate kinase OS=Geobacter uraniireducens (strain Rf4) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M+ + + E+S  DL+ KK+F+R D NVPLD++QNIT+DTRIRA +PTI + +   AKV+L+SHLGRPKG    K+S+AP   RLS LLG +V  A DCIG  V K++ S+    V++
Sbjct:    1 MSIRYIDEIS--DLREKKIFMRVDFNVPLDEHQNITEDTRIRAVLPTINYALDYNAKVVLASHLGRPKGERNAKYSMAPAAKRLSRLLGKEVKLAPDCIGDGVSKIIDSMQPGDVVM 115
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
[Close]
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3 
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113
The following BLAST results are available for this feature:
BLAST of FC932475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PENCI9.295e-2653.64Phosphoglycerate kinase OS=Penicillium citrinum GN... [more]
PGK_GEOSM1.214e-2554.29Phosphoglycerate kinase OS=Geobacter sp. (strain M... [more]
PGK_BACWK1.214e-2553.85Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_GEOUR1.586e-2551.28Phosphoglycerate kinase OS=Geobacter uraniireducen... [more]
PGK_BACHK1.586e-2552.99Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACC31.586e-2552.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC21.586e-2552.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC01.586e-2552.99Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN1.586e-2552.99Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAH1.586e-2552.99Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]

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Properties
Property NameValue
Genbank descriptionC34209A05EF PostHarveN Citrus clementina cDNA clone C34209A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932475 ID=FC932475; Name=FC932475; organism=Citrus clementina; type=EST; length=702bp
GGACGTCCACATCTTCTTCATCTTCCCCACACATATTCCTTCCCCATTCT
TCAATCAAACCAAAACCCACTTCCCATTTCCCCACTTTGTCGACAAAGTT
TCAATCTTTTGCGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGG
CTTCAGCCACCGCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGT
TCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGC
ATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATG
TGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTG
TCGATGGCGAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGG
GAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATC
AGAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAG
CATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAG
ACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTC
TTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGT
CCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAAGCGGTGTTCTTCT
TC
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