FC932475

Overview
NameFC932475
Unique NameFC932475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG    +  L P+  RL ELLG  V KAD+  GP  +++VA++ E  VL+
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLV 113          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M+K S+  L   +L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL    VLL
Sbjct:    1 MSKLSLSSLDKTNLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLL 117          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PENCH (Phosphoglycerate kinase OS=Penicillium chrysogenum GN=PGKA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 3
Query:  378 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            ++  DLKGK+V +R D NVPLD+N+N+T+  RI  A+PTIK+ I NG K V+L SHLGRP G V PK+SL P+VP L ELLG  V   +DCIGP+ E+ V    +  V+L
Sbjct:    9 VTDVDLKGKRVLIRVDFNVPLDENENVTNPQRIVGALPTIKYAIDNGRKAVVLMSHLGRPDGKVNPKYSLKPVVPVLEELLGKSVTFTEDCIGPQTEETVNKASDGQVIL 118          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_DESOH (Phosphoglycerate kinase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  378 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            L   D+ GK+V VR D NVPLDD Q ITDDTRI++AVPTI++L+  GAKVI+ SHLGRPKG   P FSLAP   RL ELL   V  A+ C+GP+V   +A +    VL+
Sbjct:    4 LKTIDVAGKRVLVRVDFNVPLDDQQQITDDTRIQSAVPTIEYLVGAGAKVIVCSHLGRPKGKPDPVFSLAPTARRLGELLDRPVEMANTCVGPDVVSRIARMAPGDVLM 112          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_STRCO (Phosphoglycerate kinase OS=Streptomyces coelicolor GN=pgk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 63/112 (56.25%), Postives = 75/112 (66.96%), Query Frame = 3
Query:  363 KSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGV 695
            K++ EL    + GK+VFVRADLNVPLD    ITDD RIRA VPT+K L   GA+VI++SHLGRPKG   P FSLAP   RL ELLG  V  A+D +G   E +V  L + GV
Sbjct:    2 KTIDELLSEGVAGKRVFVRADLNVPLDGT-TITDDGRIRAVVPTVKALADAGARVIVASHLGRPKGAPDPAFSLAPAAARLGELLGADVAFAEDTVGSSAEAVVTGLADGGV 112          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M+K S+  L    L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL    VLL
Sbjct:    1 MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLL 117          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M KK++ ++S   L+GK+V +R D NVPLD ++NITD+ RI  A+P+I+ +I NG ++IL SHLGRPKG V P FSL+P+  RLSELL   V  A DCIG EV + V +L +  VL+
Sbjct:    1 MQKKTLSDIS---LQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLM 114          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = 3
Query:  354 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            M+K S+  L    L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL    VLL
Sbjct:    1 MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAIAQSNSLSNGDVLL 117          
BLAST of FC932475 vs. ExPASy Swiss-Prot
Match: PGK_PELPD (Phosphoglycerate kinase OS=Pelobacter propionicus (strain DSM 2379) GN=pgk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.613e-25
Identity = 58/106 (54.72%), Postives = 75/106 (70.75%), Query Frame = 3
Query:  387 ADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLL 701
            ADLK KKVF+R D NVP D   NIT+DTRI  A+PTI++ I+ GA+VIL+SHLGRPKG    K+S+ P   RLSELLG +V +A DC G EV + + ++    VL+
Sbjct:   10 ADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAKRLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLM 115          
The following BLAST results are available for this feature:
BLAST of FC932475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACAC1.586e-2552.99Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA1.586e-2552.99Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_PROM92.071e-2553.85Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PENCH2.071e-2553.64Phosphoglycerate kinase OS=Penicillium chrysogenum... [more]
PGK_DESOH2.705e-2555.96Phosphoglycerate kinase OS=Desulfococcus oleovoran... [more]
PGK_STRCO3.532e-2556.25Phosphoglycerate kinase OS=Streptomyces coelicolor... [more]
PGK_PROMS3.532e-2553.85Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_CHLTE3.532e-2552.14Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_PROM24.613e-2553.85Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PELPD4.613e-2554.72Phosphoglycerate kinase OS=Pelobacter propionicus ... [more]

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Properties
Property NameValue
Genbank descriptionC34209A05EF PostHarveN Citrus clementina cDNA clone C34209A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932475 ID=FC932475; Name=FC932475; organism=Citrus clementina; type=EST; length=702bp
GGACGTCCACATCTTCTTCATCTTCCCCACACATATTCCTTCCCCATTCT
TCAATCAAACCAAAACCCACTTCCCATTTCCCCACTTTGTCGACAAAGTT
TCAATCTTTTGCGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGG
CTTCAGCCACCGCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGT
TCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGC
ATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATG
TGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTG
TCGATGGCGAAGAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGG
GAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATC
AGAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAG
CATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAG
ACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTC
TTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGT
CCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAAGCGGTGTTCTTCT
TC
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