FC932495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27 Identity = 79/239 (33.05%), Postives = 109/239 (45.61%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEE-KGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG-----------------RKYDKETKIELKRENDSKR--------------XXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 ++N LNVDCDMY N + VR A+C F+ + + AFVQ+PQ+F + EL L++Y G+ G GP Y GSGCFH R ++ G RKY E + + N + T++ C YE T WGK IG Y EDV T I I +GW S Y P+ AFLG P + +VQ++RW+ G +I+ + SP Sbjct: 284 MTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYDSNVGEL--TVLQLYLG---RGIAGIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREFGNSKEMVKSVVDALQRKPFPQKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSP 517
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 73/236 (30.93%), Postives = 109/236 (46.19%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYD---------------KETKIELKRENDSKRXXXXXXXXXTS--------------KAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 ++N + LNVDCDM++N+ Q V A+C + + FVQ PQ+F K++ + N L + Y G Y G+GCFH R+ + G + D KE + + + + K S K +SC YE+ T WG E+G YG ED++TG I GW+S + E AFLG +PT L Q KRW+ G F+I++ + +P Sbjct: 332 MTNAPIMLNVDCDMFANDPQVVLHAMCLLLGFDDEISSGFVQVPQSFYGDLKDDPFGNKLEVI----------YKGLFYGGTGCFHCRKAIYGIEPDSIVVGREGAAGSPSYKELQFKFESSEELKESARYIISGDMSGEPIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNP 557
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 77/241 (31.95%), Postives = 107/241 (44.40%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKG-HEFAFVQFPQNF--DNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDK---------ETKIELKRENDSKRXXXXXXXXXTS----------------------KAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 ++N LNVDCDMY+N + VR A+C F+ + + + AFVQFPQ F N K L + G+ G GPI GSGCFH R ++ G D+ EL E+ TS + C YE+ T WGK IG Y ED+ T I I +GW S Y P+ AFLG P L+ ++Q++RW+ G +++ + SP Sbjct: 284 MTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSQNQNHCAFVQFPQEFYDSNTIK-------LTVIKSYMGRGIAGIQGPINVGSGCFHSRRVMYGLSPDELEDNGSLSSVATRELLAEDSLSSGFGNSKEMVTSVVEALQRKPNPQNILTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSP 517
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 74/228 (32.46%), Postives = 101/228 (44.30%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEK--GHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG-------------------RKYDKETKIE---LKRENDSKRXXXXXXXXXTSK----AFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQI 608 +SN +N D D Y NNSQ R +CF +D G AFVQFPQ FD+V + Y+N R++ + ++G GP Y G+G RR L G K+ T L N + + A +C YE T WG+++G Y EDV+TG + QGW+SVY E AF G +P L + L Q RWS G ++ Sbjct: 401 LSNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEM 628
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 74/228 (32.46%), Postives = 101/228 (44.30%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEK--GHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG-------------------RKYDKETKIE---LKRENDSKRXXXXXXXXXTSK----AFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQI 608 +SN +N D D Y NNSQ R +CF +D G AFVQFPQ FD+V + Y+N R++ + ++G GP Y G+G RR L G K+ T L N + + A +C YE T WG+++G Y EDV+TG + QGW+SVY E AF G +P L + L Q RWS G ++ Sbjct: 371 LSNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEM 598
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 74/227 (32.60%), Postives = 101/227 (44.49%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKG-HEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG-------------RKYDKETKI---------ELKRENDSKRXXXXXXXXXT----SKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQI 608 +SN +N DCD Y NNSQ R +CF +D G + AFVQFPQ FD+V + Y+N R++ + ++G GP Y G+G RR L G + D K L N + + A +C Y+ T WG++ G Y EDV TG + QGW+SVY E AF G +P L + L Q RWS G ++ Sbjct: 411 LSNAPFIINFDCDHYVNNSQAFRAPMCFMLDRRGGGDDVAFVQFPQRFDDVDPTDRYANHNRVFFDGTTLSLNGLQGPSYLGTGTMFRRAALYGLEPPRWGAAGSQIKAMDNANKFGASSTLVSSMLDGANQERSITPPVAIDGSVARDLAAVTACGYDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEM 637
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 73/239 (30.54%), Postives = 106/239 (44.35%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEE-KGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG-----------------RKYDKETKIELKRENDSKR--------------XXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 ++N LNVDCDMY+N + VR A+C F+ + + AFVQFPQ F + +E L + G+ G GP Y GSGCFH R ++ G RKY E + + N ++ ++ C +E T WGK IG Y ED T I I +GW S Y P+ AFLG P + ++Q++RW+ G +++ + SP Sbjct: 284 MTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSMNSNHCAFVQFPQEFYDSNADE-----LTVLQSYLGRGIAGIQGPTYAGSGCFHTRRVMYGLSIDDLEDDGSLSSLATRKYLAEENLAREFGNSNEMVTSVVEALQRKPNPQNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSP 517
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 76/244 (31.15%), Postives = 109/244 (44.67%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEF-AFVQFPQNFDNVTKNELYSNSLRIYNEVEFE---GMDGYGGPIYCGSGCFHRREILCGRKYDK--------------------------ETKIELKRENDSKRXXXXXXXXXTSKAFAS-----CTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPAR 635 ++N LNVDCDMY+N++ VR A+C + E + AFVQF Q F Y +S + ++ G+ G GPIY GSGC H R ++ G D +K +K D+ + T+ A+ C YE T WG IG Y ED+ T I I +GW S Y P+ AFLG P + + L+Q++RW+ G +I+ + SP R Sbjct: 285 MTNAPYILNVDCDMYANDADVVRQAMCILLQESLNMKHCAFVQFRQEF--------YDSSTELIVVLQSHLGRGIAGIQGPIYIGSGCVHTRRVMYGLSPDDFEVDGSLSSVATREFLVKDSLARRFGNSKEMMKSVVDAIQRNPNPQNILTNSIEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLR 520
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKR 326 +SN LNVDCD Y NNS+ +R+A+CF MD + G + +VQFPQ FD + K++ YSN ++ ++ +G+DG GPIY G+GC RR+ L G +D K + KR Sbjct: 540 LSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYG--FDAPKKKKTKR 643 HSP 2 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 390 SCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHG 647 SC YE T+WGKEIG YG ED++TG + GW+SVYC P+ AF G +P L L Q RW+ G +I L R+ P Y +G Sbjct: 747 SCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 832
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETK 311 +SN LNVDCD Y NNS+ +R+A+CF MD + G + +VQFPQ FD + +++ YSN ++ ++ +G+DG GPIY G+GC RR+ L G K+ K Sbjct: 552 LSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAPKKKK 652 HSP 2 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 390 SCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHG 647 SC YE T+WGKEIG YG ED++TG + GW+SVYC P+ AF G +P L L Q RW+ G +I L R+ P Y +G Sbjct: 762 SCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 847 The following BLAST results are available for this feature:
BLAST of FC932495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932495 ID=FC932495; Name=FC932495; organism=Citrus clementina; type=EST; length=695bpback to top |