FC932495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSK 341 +SNG LN+DCD Y N + VR+ +CF MD G + ++QFPQ F+ + ++ Y+N+ ++ + +DG GP+Y G+G RR L G K+ K+E++++ Sbjct: 602 LSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGVQGPVYVGTGTMFRRFALYGFDPPNPDKLLEKKESETE 711 HSP 2 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 375 SKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 620 S + SC YE T+WG +G YG EDV+TG + +GW+SVYC +RD+F G +P L L Q RW+ G +I R Sbjct: 781 SVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSR 862
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 287 +SNG LN+DCD Y NS+ +++ +CF MD G ++QFPQ F+ + ++ Y+N ++ + +DG GP+Y G+GC RR L G Sbjct: 515 LSNGAFILNLDCDHYIYNSKAIKEGMCFMMDRG-GDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPVYVGTGCMFRRYALYG 606 HSP 2 Score: 79.7221 bits (195), Expect = 1.617e-14 Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 381 AFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 620 A SC YE NT+WG IG YG EDV+TG + +GW+SVYC +RDAF G +P L L Q RW+ G +I + Sbjct: 715 AVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSK 794
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 34/93 (36.56%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 287 +SNG LN DCD Y N Q +R+A+C+ +D G ++QFPQ F+ + ++ Y+N ++ + +DG GP+Y G+GC RR + G Sbjct: 484 LSNGPFMLNFDCDHYIYNCQAIREAMCYMLDRG-GDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAIYG 575 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 375 SKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 620 S + SC YE NT+WG+ +G YG EDV+TG + +GW+SVYC RDAF G +P L L Q RW+ G +I + Sbjct: 689 SVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSK 770
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 34/93 (36.56%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 287 +SNG LN DCD Y N Q +R+A+C+ +D G ++QFPQ F+ + ++ Y+N ++ + +DG GP+Y G+GC RR + G Sbjct: 484 LSNGPFMLNFDCDHYIYNCQAIREAMCYMLDRG-GDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAIYG 575 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 375 SKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 620 S + SC YE NT+WG+ +G YG EDV+TG + +GW+SVYC RDAF G +P L L Q RW+ G +I + Sbjct: 689 SVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSK 770
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 287 ++NG LN+DCD NNS +R+A+CF MD G+ FVQF ++ ++E + +DG GP+Y GSGC R+ L G Sbjct: 324 LTNGAYVLNLDCDHCVNNSSALREAMCFMMDPVAGNRTCFVQFALRDS--------GGGDSVFFDIEMKCLDGIQGPVYVGSGCCFSRKALYG 408 The following BLAST results are available for this feature:
BLAST of FC932495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932495 ID=FC932495; Name=FC932495; organism=Citrus clementina; type=EST; length=695bpback to top |