FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30 Identity = 73/208 (35.10%), Postives = 120/208 (57.69%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL----SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAI-GSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKS 677 +YD T +SP GR++QVEYAM A++ A +G+ +K +VL K ++L +S +K+FK+D+H+ A+AG+T+D +L Y R + Y Y+ P+PV +LV Q+ D Q TQ RP+GV L AG D G LY + PSGN+ ++A +I G SQ A++ L ++ + + ++ ++ AL + +T+ + S Sbjct: 4 RYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYK--PDISLKEALQLALKVLTKTMDRSNINS 209
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.607e-30 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ-GETLKSS 680 YD +T +SP G L+QV+YA EAVK+G +G+++K+ VVL + ++L +KIF +DDH+G AGL +DGR+L Y RS+ + + Y+ P+ + L ++D Q TQ RP+GV L+V G+D+ K L PSG + Y A AIG A YLE+ ++ + + I AL A+ TL+ GE L S Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYK--EDLDIQSTILLALRALMATLKPGEKLNYS 213
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.607e-30 Identity = 78/212 (36.79%), Postives = 122/212 (57.55%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD--EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICT 689 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVL K+ +L S +KI +D+HI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D + LY PSG + ++A A G S + + +LE+ N+ ES ++ +K A+ A+ E ++ G+ ++ ++ T Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEK---NYKESAGQETVKLAIRALLEVVESGGKNIEVAVMT 211
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.630e-30 Identity = 77/217 (35.48%), Postives = 123/217 (56.68%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE 713 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L S +F V ++G+ G+TAD R L + R+E + + Y +P L +ADK+QV TQ ++ RP GV +V G+DE+ L Y C P+G+++ ++A + G + Q A +LE++ + T ++ ++ A+ A++ LQ E K++ V VV A + Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQ-EDFKATEIEVGVVRADD 224
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.127e-29 Identity = 81/206 (39.32%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 683 YD +T +SP GRL+QVEYA EAV++G+ A+G++ VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ EN S +L AL E L+ E + +I Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAI 215
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.127e-29 Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 683 YD +T +SP GRL+QVEYA EAV++G+ A+G++ K VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ E+ + + +L AL E L+ E + +I Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTEELKPENIDMAI 215
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.127e-29 Identity = 77/223 (34.53%), Postives = 126/223 (56.50%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHIL 728 ++Y +T +SP G L QVEYA EAV++GS A+G+R VVLG + SE+ + +KI +D H+ +A AGLTAD R+L + EC ++ +E+ + + + LA Q TQ + +RP+G+ L+ G+D G A L++ PSG + EY+A A G + + + E+ + + +T+ D IK A+ A+ E Q ++ VAV+ G+ +L Sbjct: 3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMR---LEVAVLENGKPMKML 222
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.127e-29 Identity = 81/229 (35.37%), Postives = 128/229 (55.90%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHI 725 R++YD V+T+SP GRLFQVEY++EA+K GS AIG+ +K VVLG +A S L S +KI ++D HIG A++GLTAD R + + R+ + ++ Y+ + V L + D A +R RP+GV LL+AG D + G L++ PSG ++ Y A AIGS S+ A+ L + + +L+ ++ I + + E L + ++ + + F I Sbjct: 5 RSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELL---VLKILKQVMEEKLDENNAQLSCITKQDGFKI 230
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.472e-29 Identity = 71/210 (33.81%), Postives = 118/210 (56.19%), Query Frame = 3 Query: 60 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 683 M +Y +TT+SP+G+L Q+EYA+ AV G+ ++G+ + VV+ NK S L ++ + +HIG+ +G+ D R+L + R Y TY+ P+PV +LV ++A Q TQ RP+GV LL+ G D +LY + PSG YF ++A A+G + KT+LE+R+ E +D + A++ ++E +G+ +I Sbjct: 1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLE--LDDAVHTAILTLKEGFEGKMTADNI 208
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29 Identity = 69/174 (39.66%), Postives = 103/174 (59.20%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 590 YD +T +SP G+++QVEYA EAVK+G +G++ K VVL + S L SS +KI+ +D+H+ + +GL AD R+L Y R +++ + Y+ P+ V L + + Q TQ RP+GV LL+AG+D GA LY PSG Y Y A AIG+ S +LE+ ++ Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYK 182 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |