FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 76/199 (38.19%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE 665 YD +T +SP GRL+QVEYA EAVK+G+ A+G++ +VL + NS+L S +KIFK+D+HIGVA +GL D R L R E +Y+ + V L +L D Q TQ RPYG LL+AG+ + L+ PSG EY+A IG A E + E++ D I L A+ +G+ Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYN--PEASIRDAILLGLKALHAATEGK 205
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 71/201 (35.32%), Postives = 113/201 (56.22%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ---KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG--AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS-ESTREDLIKDALMAIRETLQ 659 YD ++ +SP G +FQVEYA+EAVK+G+ A+G++ K VVLGC ++ +L + K+ K+D H+ ++ +GL AD R+L R E ++ T E P+ V L +A Q TQ RP+GV L+AG D + LY PSG Y + A IG S+ + +LE+ ++ +T E+ +K + ++ E +Q Sbjct: 4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQ 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 81/229 (35.37%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPL-------PVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHI 725 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+ + VVL + S L S +KI +VD HIG A +GL AD R L R EC N+ + Y + V L +Q D + RP+GV +L AG++ L++ PSG + + A AIGS S+ A+ L+ F + T ++ I +L +++ ++ E L S+ V + F++ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFR--PDLTLDEAIDISLNTLKQVME-EKLNSTNVEVMTMTKEREFYM 230
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 71/174 (40.80%), Postives = 99/174 (56.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 590 YD +T +SP GRLFQVEYA EAVK+G+ A+G+++ VVL + S L + +KIF++DDHIG A +GL AD R L R E +Y+ + V + ++ D Q TQ RPYG LL+AG+D+K L+ PSG EY+A AIG+ A E ++ Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYK 180
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAI 644 YD +T +SP GRLFQVEYA EAVK+G+ A+G+++ VVL + S L + +KIF++DDHIG A +GL AD R L R E +Y+ + V + ++ D Q TQ RPYG LL+AG+D+ L+ PSG EY+A AIG+ A E F RED+ DA + + Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAV-------VEVFEADYREDMNIDAAILL 193
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 ++YD VT +SP GRL QVEYA EAV++GS A+G+R VVLG K+ ++L + +KI V DH+ +A AGLT D R+L + EC ++ E P+ + + +A Q TQ + +RP+G+ L+ G D G+ +L+ PSG ++EY+A A G ++ + + E+++ ST +K A+ A+ E Q Sbjct: 3 SRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKIC-VLDHVVMAFAGLT-DARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQ 200
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTRED 617 YD +T +SP GRL+QVEYA EAVK+G+A++G+R+ +VL ++ S L + +KI K DDH+G+A AG AD R L + R + Y P+ + L + D Q TQ RP+GV LL+ G+++ LY PSG +E++A +IG+ + +LE EN++E D Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLE---ENYTEELSLD 189
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27 Identity = 65/173 (37.57%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER 581 +YD VT +SP G L QVEYA EAV++GS +GLR+ +V+G ++ +L + +KI +DDH+ + +GLTAD R+L + E ++ +E P V + +A Q TQ + +RP+G+ LV G DE G HL+ PSG ++E++A G SQ + Y+E+ Sbjct: 4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEK 176
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 78/211 (36.97%), Postives = 111/211 (52.61%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 701 YD +T +SP GRL+QVEYA EAVK+G+A+IG+R+ VVL + S L S +KI K DDHIG+A AG AD R L + R + Y P+ V L ++ D Q TQ RP+GV L++ G+ L+ PSG +E++A A+G+ + YLE E++ E D D +A ++ + L VA V Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLE---EHYDEGMDLDEGVDLALAALASVNDDELSPEGIGVATV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27 Identity = 76/194 (39.18%), Postives = 109/194 (56.19%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRE 650 YD +T +SP GRL+QVEYA EAVK+G+A+IG+R+ VVL + S L S +K+ K+DDH+G A AG AD R L + R + Y+ P+ V L + D Q TQ RP+GV LL+AG++ L+ PSG E++A AIGS + +LE ++ + + +D I AL A+ E Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYD--AGLSVDDGIDLALRALNE 201 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |