FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.052e-35 Identity = 88/211 (41.71%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 701 YD +T +SP GRLFQVEYA EAVK+G+ A+G++ + VVLG + S+L + +K++++D HIG A AGL AD RVL R E Y YTY P+ V LV + D QV TQ RP+G LL+AG+D KG L+ PSG E++A AIG Q A E + + T ++ I+ A+ A+ E + ET ++ +AVV Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYR--EDMTLQEAIELAVRALYEASREETTADNL-EIAVV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.052e-35 Identity = 84/214 (39.25%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 701 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +K++K+DDH+ A+AG+ +D +L R + Y++ Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ +QAA++ L++ +++ ++TRE+ ++ AL + +T+ +L S +A V Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKD--DATREEAVELALKVLTKTMDSTSLTSEKLELAEV 215
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.999e-35 Identity = 83/214 (38.79%), Postives = 132/214 (61.68%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 701 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +K++K+DDH+ A+AG+ +D +L R + Y+++Y+ P+PV +LV L D Q TQ P+GV L AG D+ G L+ + PSGNY ++A AIG+ +QAA++ L++ +++ + TRE+ ++ AL + +T+ +L S +A V Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKD--DITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.520e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34 Identity = 88/215 (40.93%), Postives = 129/215 (60.00%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE 713 YD +T +SP GRLFQV+YA EAVK+G+ A+G++ K VVL + S+L + +KIF++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q+ TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E ++ + E T E+ IK A++A+ + ++ + +S VAV+ E Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD--EMTLEEAIKLAVLALSKIMEEPSPES--IEVAVISVKE 219 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |