FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34 Identity = 83/211 (39.34%), Postives = 126/211 (59.72%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPV---GRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 683 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S +KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V + + LA + + S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ ++ E T ++ AL +++ ++ + +++ Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN--KELTLQEAETIALSILKQVMEEKVTPNNV 213
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34 Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHI 725 R +YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVL + S L S +KI ++DDHIG A++GL AD R L + R E N+ ++Y P+ V L D A + S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ +F + T ++ A+ +++ ++ + ++ V + A+H+ Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN--KDITLQEAETIAVSILKQVMEEKVTPNN---VDIAKVAPAYHL 224
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34 Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF 587 R +YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVL + S L S +KI ++DDHIG A++GL AD R L + R E N+ ++Y P+ V L D A + S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ +F Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQF 183
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.851e-34 Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 683 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S +KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V L D A + S RP+GV LL+AG DE G LYY PSG +++ AIGS S+ A + L+ +F + T ++ AL +++ ++ + +++ Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFN--KDLTLQEAETIALSILKQVMEEKVTPNNV 213
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.851e-34 Identity = 77/194 (39.69%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 87 VTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG 662 +TT+SP+GRL Q+EYA A +G+ A+G+++ VV+ K S L+ K+F +DDH+G +G+ D RVL R C Y TY P+P+ +LV Q++ Q TQ RP+G LLVAG D +G HLY PSG ++ ++A +IG S A+T+LE+R+ N E ED + AL+ ++E G Sbjct: 8 LTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTN--EMEIEDAVHTALLTLKEGFDG 199
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 668 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + + ++D IK A++A+ +TL+ T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 668 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + + ++D IK A++A+ +TL+ T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33 Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A AGLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + S ++ IK A+ A+ E +Q Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQ 202
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHIL 728 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IGV +G+ D RVL R R + Y Y+ P+PV +LV + A Q TQ RP+GV LLVAG D+KG LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +GE + S + +GA + F +L Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGFEGE-ISSKNIEIGKIGADKVFRVL 222
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 +YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +D+H+ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG ++ + +LE+ + + + ++ D IK A+ A+ E +Q Sbjct: 4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQ 202 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |