FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 78/200 (39.00%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A AGLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + ++ + IK A+ A+ E +Q Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQ 202
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33 Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S L S +KIF++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK LY PSG YFE++A AIGS A E + + + E IK A++A+ +TL+ Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSD--DIDMEGAIKLAILALAKTLE 203
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33 Identity = 84/211 (39.81%), Postives = 122/211 (57.82%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTV 692 YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L +KIF++DDHI A +G+ AD RVL R E Y TY P PV +V ++ D Q+ TQ RP+G LL+AG++++ LY PSG YF ++A AIGS A E ++ + + ED IK ALMA+ +T++ + ++ ++ TV Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD--DMNLEDAIKLALMALAKTMENPSADNIEVAVITV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33 Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ L+ PSG Y YQA AIG A +LE+ ++ + E+ I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLNVEETILLALKALSATLK 204
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33 Identity = 84/197 (42.64%), Postives = 117/197 (59.39%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG+++K LY PSG YFE++A AIGS A E + + + E IK A++A+ +TL+ Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSD--DLDMEGAIKLAILALAKTLE 203
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.089e-32 Identity = 83/211 (39.34%), Postives = 124/211 (58.77%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTV 692 YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L + +KIF++DDHI A +G+ AD RVL R E + TY P P+ +V ++ D Q+ TQ RP+G LL+AG++EK LY PSG YF ++A AIGS A E ++++ + + E+ IK A+ A+ +T++ E ++ +I TV Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKD--DMSLEEAIKLAIFALAKTMEKPSAENIEVAIITV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.089e-32 Identity = 81/222 (36.49%), Postives = 126/222 (56.76%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHIL 728 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IG +G+ D RVL R R + Y Y+ P+PV +LV + A Q TQ RP+GV LLVAG D+KG LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +GE + S + +G + F +L Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGFEGE-ISSKNIEIGKIGTDKVFRVL 222
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.422e-32 Identity = 82/211 (38.86%), Postives = 124/211 (58.77%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTV 692 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S L + +KIF++DDHI A +G+ AD RVL R E + TY P P+ +V ++ D Q+ TQ RP+G LL+AG+++K LY PSG YF ++A AIGS A E ++ + + T ++ IK A+ A+ +T++ E ++ ++ TV Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRD--DMTLDEAIKLAIFALAKTMEKPSAENIEVAVITV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.422e-32 Identity = 80/215 (37.21%), Postives = 124/215 (57.67%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE 713 YD +T +SP GRLFQVEYA EAVK+G+ ++G++SK +VL + S+L + +KIF++D+HIG A +GL AD R + R E TY P+ V L ++ D Q+ TQ RP+G L++ G++ +G L+ PSG EY+A AIG+ AA E+++ + + I+ AL A+ E +G+T S+ +AV+ A + Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSD--DMNLNQAIELALDAVYEATEGKTTPESV-EIAVIEAAD 220
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32 Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 N+YD +T +SP G LFQVEYA EAVK+GS A+G+R K +V+G K+ L + +KI +DDH+ +A AGL+AD RVL R EC +Y T E P+ V + +A+ Q TQ +RP+G+ +L+ G D G L+ PSG Y+EY A A G + + YLE E +SE D + ++ Q Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLE---EQYSEENTVDEATTLKLVVKSLAQ 198 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |