FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 82/210 (39.05%), Postives = 121/210 (57.62%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTV 692 +YD +T +SP G LFQVEYAMEAV++G+ A+G+R K +VLG KA ++L + +KI K+DDHI + AGLTAD RVL EC +Y T E V + +A Q TQ RP+G+ L+ G D G +LY PSG+Y ++A AIG S++ +LE+ N+++ + E+ IK A+ A+ E ++ I + Sbjct: 5 RYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEK---NYTDVSEEESIKLAVRALLEIVESGNKNIEIAVI 211
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE 713 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGE 223
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE 713 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGE 223
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 77/205 (37.56%), Postives = 118/205 (57.56%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 683 Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q KI + HIG+ +G+ D RVL R R Y Y+ P+P G+LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEENI 208
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE 713 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGE 223
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE 713 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGE 223
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSEC-INYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 701 ++Y +TT+SP G+L Q+EYA+ AV G ++G+++ VVL K SEL+ + +K+ + IG+ +G+ D RVL R Y Y P LV ++A Q TQ RP+GV LLVAG+DEKG LY PSG YF ++A AIG S AAKT+LE+R+ + E +D + A++A++ET +GE + +I +AVV Sbjct: 3 DKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND--ELELDDAVHTAILALKETFEGELTEDNI-EIAVV 213
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE 713 YD +T +SP GRLFQVEYA EAVK+G+ +IG++ +VL + S L ++ +KIFK+D+HIG A +GL AD R L R E TY P+ V L +L D Q+ TQ RP+G L++ G+ + L+ PSG EY+A AIGS AA E ++++ + + I AL AI E + ET +++ +AV+ GE Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKD--DMNLNEAINLALTAINEATEHETTANNV-EIAVIKCGE 220
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQ 200
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 77/198 (38.89%), Postives = 118/198 (59.60%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQ 200 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |