FC932496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31 Identity = 82/227 (36.12%), Postives = 131/227 (57.71%), Query Frame = 3 Query: 66 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHI 725 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHM 228
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31 Identity = 76/210 (36.19%), Postives = 118/210 (56.19%), Query Frame = 3 Query: 60 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 683 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q K+ + HIG+ +G+ D RVL R R Y Y+ P+P +LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31 Identity = 85/223 (38.12%), Postives = 126/223 (56.50%), Query Frame = 3 Query: 69 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVL-SRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEAFHIL 728 ++Y +TT+SP+G+L Q+EYA+ AV QG A+G+++ +VL K++S L+ S KI + +IG+ +G+ D RVL R + Y Y P LV +A Q TQ RPYGV LL+AG DE G LY PSG+YF ++A AIG + AKT+LE+R+ E ED + AL+ ++ET++GE + + +VG A H+L Sbjct: 3 DRYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLE--LEDAVHIALLTLKETIEGE-MNGDTIEIGIVGP-PADHLL 221
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 3 Query: 72 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA--HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICT 689 +YD +T +SP G LFQVEYAMEAV++G+AA+G+R VVLG K+ +L + +KI +DDHI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ N+ E++ ++ +K A+ A+ E ++ G+ ++ ++ T Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEK---NYKETSGQETVKLAIRALLEVVESGGKNIEVAVMT 211
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.576e-31 Identity = 81/209 (38.76%), Postives = 115/209 (55.02%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTV 692 YD +T +SP GRL+QVEYA EAV++G+ AIG+ K VVL + S+L + +KIF++DDH+ A +GL AD RVL R E Y TY + + L ++ D Q TQ RP+GV LL+AG+D+ A L+ PSG EY+A AIGS LE+ + ++ + +L AL E ++ E + I TV Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENVDVCIITV 217
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.576e-31 Identity = 79/221 (35.75%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 60 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAG 710 M +YD+ T +SP GRL+QVEYA+E++ AIG+ + +VL K S L + +K++K++D I VA+AGLTAD +L R NY TY +PV LV +L+D Q TQ RP+GV + AG D++ G LY + PSGNY ++A ++G+ + AA+T L+ +++ + +D I+ AL + +T L A + G Sbjct: 1 MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD--DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKG 219
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.019e-30 Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 659 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + E+ + + + T + IK + A+ E +Q Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQ 200
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.019e-30 Identity = 78/215 (36.28%), Postives = 124/215 (57.67%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGA 707 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L S +F + +IG+ G+TAD R L + R++ + +TY +PV L +ADK+QV TQ ++ RP GV +V G+DE+ L Y C P+G+++ ++A + G + Q A +LE++ + T ++ ++ A+ A++ LQ E K++ V VV A Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ-EDFKATEIEVGVVRA 222
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30 Identity = 87/214 (40.65%), Postives = 118/214 (55.14%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGA 707 YD +T +SP GRLFQVEYA EAVK+GS A+GL+ V+L K S+L +KI +DD++ +GL AD RVL + R TY S + + LV ++AD+ Q TQ RPYGV L+ AG+D+ G L+ P+G EY+A AIGS A ++LE+ + E SE L AL A E +GE LK+ VG+ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE--EGEELKAPEIASITVGS 219
BLAST of FC932496 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30 Identity = 82/206 (39.81%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 75 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 683 YD +T +SP GRL+QVEYA EAV++G+ A+G++ K VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ EN + S +L AL E L+ E + +I Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAI 215 The following BLAST results are available for this feature:
BLAST of FC932496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932496 ID=FC932496; Name=FC932496; organism=Citrus clementina; type=EST; length=730bpback to top |