FC932499

Overview
NameFC932499
Unique NameFC932499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: SPG16_HUMAN (Sperm-associated antigen 16 protein OS=Homo sapiens GN=SPAG16 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   53 TQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC-AGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS 487
            T W++D  F PS  +LATSS D TV++WD    D  L TF GHS  V S  +H S  + + S   +   + W +N+  C   ++        + F P    +L ++ +  +SI D  T +C   L GH + ++   ++  G  +AS
Sbjct:  394 TDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCIL-TFEGHSRAVWSCTWH-SCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIAS 537          

HSP 2 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 52/174 (29.89%), Postives = 81/174 (46.55%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN-GSCAGVFKCQSGATQMRFQPRLGRILAAAVEN-YISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWS 517
            +W   S   + TL   T  +  + F P  + L TSSAD+T+ +WD        ++  GH  ++    F P +  ++ SCD     + W          +    S   ++ F    GR+LA A  N  I +LD+++     KL GH+N+ H+V ++  GE L S  SD  VR WS
Sbjct:  462 IWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDART-GICEQSLYGHMHSINDAIFDP-RGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSS-GRVLAQASGNGVIHLLDLKSGEIH-KLMGHENEAHTVVFSHDGEILFSGGSDGTVRTWS 631          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 62/230 (26.96%), Postives = 95/230 (41.30%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENRH*L*VHTT 691
            +W   S     TLE  T W+  V FSP  + LA+ S D TVR+WD    +     F GH+  V+ + F P    ++ S   +   R W++  G+   V K  +     + F P    + + + +  I + DV T   R  LQ     V S+ ++  G  L   SD  V +W + S   GE +H      +   +  F P    L       T+ LW++         HTT
Sbjct:  485 VWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAE-ERAVFEGHTHYVLDIAFSPD-GSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVAS---GEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEE----HTT 705          

HSP 2 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 55/197 (27.92%), Postives = 92/197 (46.70%), Query Frame = 2
Query:   71 VRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNM 655
            V FSP  S LA  S D+ + VWD  + D  L T  GH+  V ++ F P    LL S  +++ +R W +       VF+  +     + F P    + + + +    + +V T      L+GH + V++V ++  G  +AS S D  +R+W + +G + +    L        S  F P   S+LV G   T+ LW++
Sbjct:  465 VAFSPGGSLLAGGSGDKLIHVWDVASGD-ELHTLEGHTDWVRAVAFSPDGA-LLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDV---LQAPAENVVSLAFSPD-GSMLVHGSDSTVHLWDV 655          

HSP 3 Score: 71.2478 bits (173), Expect = 5.947e-12
Identity = 50/176 (28.41%), Postives = 80/176 (45.45%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGS 526
            LW   + T  + L+  T ++  V FSP  S +A+ S D T+R+WD              +  V+SL F P    L+   D  S +  W + +G     F+  +   + + F P    + + + +  I + DV  Q     L+GH   VHSV ++  G  LAS S D  +R+W I +
Sbjct:  569 LWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGK-ERDVLQAPAENVVSLAFSPDGSMLVHGSD--STVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIAT 741          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556
            +T V F P  S + ++S D T++VWD E  D+  RT  GH+ +V  + F  S + LL SC  +  I+ W      C           + +   P    I++AA +  I + +V+T  C     GH+  V  V  N  G  +AS S D+ VRVW + +    EC  EL
Sbjct:  111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAEL 272          

HSP 2 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 56/243 (23.05%), Postives = 103/243 (42.39%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY---------------------LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667
            +W  E+   + TL+  T  + D+ F  S   LA+ SAD T+++WD +  +  +RT  GH   V S+   P+  D + S   +  I+ W +  G C   F       +M    + G ++A+ + +  + +  V T+ C+ +L+ H++ V  + W     Y                     L+   D+ +++W +   S G C+  L    N     +FH     +L     +TL +W+    R
Sbjct:  134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPN-GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 54/199 (27.14%), Postives = 93/199 (46.73%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWN 652
            +T+V F+ S S   T S DRT +VWDT + +  L T  GH   V ++ F+    D + +   +   + WS   G C   F+  +     + F P+   I   +++    + D+++    L L GH  ++ S+ +NT+G+ L + S D  V VW I SG +   IH L     +  S  F+     +      ++ +LW+
Sbjct:   95 LTNVAFNKSGSSFITGSYDRTCKVWDTASGE-ELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRR---IHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWD 289          

HSP 2 Score: 70.4774 bits (171), Expect = 1.014e-11
Identity = 50/217 (23.04%), Postives = 90/217 (41.47%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILA-AAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELW 649
            LW  +S     TL      I  + F+ +  RL T S D TV VW+  +    + T  GH   + S  F+     L+ +   +   + W   NG C                   G+++A A+ +    +    ++ C  KL+GH+ ++  +C+N  G  + + S D+  R+W   +G   EC+  L    ++  SC F+    +++      T  +W
Sbjct:  203 LWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPS-GRRIHTLIGHRGEISSAQFNWDCS-LIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTG---ECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TUP1_CANAL (Transcriptional repressor TUP1 OS=Candida albicans GN=TUP1 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 50/180 (27.78%), Postives = 84/180 (46.67%), Query Frame = 2
Query:   59 WITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKL-------QGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNK 574
            +I  V FSP    LAT + D+ +R+WD       ++   GH   + SLDF P   D L S   +  +R W +    C+     + G T +   P    I A +++  + + D  T     +L        GH++ V+SV ++ +GE +AS S D  V++W +   S  +   E++  G+K
Sbjct:  259 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRI-IKILRGHEQDIYSLDFFPD-GDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHK 436          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NUDF_ASPOR (Nuclear distribution protein nudF homolog OS=Aspergillus oryzae GN=nudF PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 55/195 (28.21%), Postives = 91/195 (46.67%), Query Frame = 2
Query:   26 TVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDF-HPSKEDLLCSCDNNSEIRYW--SINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDEL-VRVWSIGSGSKGECIHELSCTGNKFHSCVFHP 598
            TV+ +LE     +  V F P+ S +A+ S D T+++WD E  +   RT  GH+  V  +D+  P    LL SC ++  I+ W  + N  +   +       + +RF P    +++A+ +N + I DV T  C   + GH + V  V  +  G +L S   ++  R+W I + S  E    +    N    C F P
Sbjct:  106 TVRYSLESHRDKVNCVAFHPTFSSIASGSDDCTIKIWDWELGELE-RTLKGHTRAVRDVDYGGPRDNVLLASCSSDLSIKLWKPTDNYKNIRTLQGHDHIVSAVRFIPSRNLLVSASRDNDMRIWDVTTGYCVKTINGHTDWVRDVSISFDGRFLFSTGQDMTARLWDISTVSNIEHKRTMLGHENFIECCAFAP 299          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556
            +T V F P  S + ++S D T++VWD E  D+  RT  GH+ +V  + F  S + LL SC  +  I+ W      C           + +   P    I++A+ +  I + +V+T  C     GH+  V  V  N  G  +AS S D+ VRVW + +    EC  EL
Sbjct:  111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAEL 272          

HSP 2 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 56/243 (23.05%), Postives = 103/243 (42.39%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY---------------------LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667
            +W  E+   + TL+  T  + D+ F  S   LA+ SAD T+++WD +  +  +RT  GH   V S+   P+  D + S   +  I+ W +  G C   F       +M    + G ++A+ + +  + +  V T+ C+ +L+ H++ V  + W     Y                     L+   D+ +++W +   S G C+  L    N     +FH     +L     +TL +W+    R
Sbjct:  134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556
            +T V F P  S + ++S D T++VWD E  D+  RT  GH+ +V  + F  S + LL SC  +  I+ W      C           + +   P    I++A+ +  I + +V+T  C     GH+  V  V  N  G  +AS S D+ VRVW + +    EC  EL
Sbjct:  111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAEL 272          

HSP 2 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 56/243 (23.05%), Postives = 103/243 (42.39%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY---------------------LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667
            +W  E+   + TL+  T  + D+ F  S   LA+ SAD T+++WD +  +  +RT  GH   V S+   P+  D + S   +  I+ W +  G C   F       +M    + G ++A+ + +  + +  V T+ C+ +L+ H++ V  + W     Y                     L+   D+ +++W +   S G C+  L    N     +FH     +L     +TL +W+    R
Sbjct:  134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556
            +T V F P  S + ++S D T++VWD E  D+  RT  GH+ +V  + F  S + LL SC  +  I+ W      C           + +   P    I++A+ +  I + +V+T  C     GH+  V  V  N  G  +AS S D+ VRVW + +    EC  EL
Sbjct:  111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAEL 272          

HSP 2 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 56/243 (23.05%), Postives = 103/243 (42.39%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY---------------------LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667
            +W  E+   + TL+  T  + D+ F  S   LA+ SAD T+++WD +  +  +RT  GH   V S+   P+  D + S   +  I+ W +  G C   F       +M    + G ++A+ + +  + +  V T+ C+ +L+ H++ V  + W     Y                     L+   D+ +++W +   S G C+  L    N     +FH     +L     +TL +W+    R
Sbjct:  134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371          
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556
            +T V F P  S + ++S D T++VWD E  D+  RT  GH+ +V  + F  S + LL SC  +  I+ W      C           + +   P    I++A+ +  I + +V+T  C     GH+  V  V  N  G  +AS S D+ VRVW + +    EC  EL
Sbjct:  111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECKAEL 272          

HSP 2 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 56/243 (23.05%), Postives = 103/243 (42.39%), Query Frame = 2
Query:    5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY---------------------LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667
            +W  E+   + TL+  T  + D+ F  S   LA+ SAD T+++WD +  +  +RT  GH   V S+   P+  D + S   +  I+ W +  G C   F       +M    + G ++A+ + +  + +  V T+ C+ +L+ H++ V  + W     Y                     L+   D+ +++W +   S G C+  L    N     +FH     +L     +TL +W+    R
Sbjct:  134 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371          
The following BLAST results are available for this feature:
BLAST of FC932499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SPG16_HUMAN3.725e-1430.82Sperm-associated antigen 16 protein OS=Homo sapien... [more]
PKWA_THECU3.725e-1426.96Probable serine/threonine-protein kinase pkwA OS=T... [more]
LIS1_PIG3.725e-1431.74Platelet-activating factor acetylhydrolase IB subu... [more]
WDR69_XENLA4.865e-1427.14WD repeat-containing protein 69 OS=Xenopus laevis ... [more]
TUP1_CANAL6.354e-1427.78Transcriptional repressor TUP1 OS=Candida albicans... [more]
NUDF_ASPOR6.354e-1428.21Nuclear distribution protein nudF homolog OS=Asper... [more]
LIS1_RAT8.298e-1431.14Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1_PANTR8.298e-1431.14Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1_MOUSE8.298e-1431.14Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1_HUMAN8.298e-1431.14Platelet-activating factor acetylhydrolase IB subu... [more]

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Properties
Property NameValue
Genbank descriptionC34209C06EF PostHarveN Citrus clementina cDNA clone C34209C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932499 ID=FC932499; Name=FC932499; organism=Citrus clementina; type=EST; length=707bp
TGTGTTATGGTGCACGGAGTCTTTTACGGTAAAGTCTACACTTGAGGAAC
GTACTCAATGGATAACTGATGTCCGTTTCAGTCCAAGCCTATCAAGGCTG
GCTACATCTTCAGCTGATAGAACTGTCAGGGTTTGGGATACTGAAAATCC
TGACTATTCACTTCGTACTTTTACGGGTCATTCTACAACTGTTATGTCTT
TGGATTTCCATCCTAGTAAAGAAGACCTTCTCTGTTCTTGTGATAATAAT
AGTGAGATACGATACTGGAGTATCAACAATGGTAGCTGTGCTGGAGTTTT
CAAGTGTCAGAGTGGTGCAACCCAGATGAGATTTCAACCTCGTCTTGGAA
GGATTCTTGCTGCAGCCGTAGAGAACTATATCTCTATACTTGATGTAGAG
ACCCAAGTTTGCAGACTTAAATTACAGGGTCATAAAAATCAAGTTCATTC
TGTGTGCTGGAACACTTCGGGTGAGTATCTGGCATCAGTGAGTGACGAAT
TAGTCAGGGTGTGGAGCATTGGTTCTGGCAGCAAAGGGGAATGCATTCAT
GAGTTAAGCTGTACTGGCAACAAATTCCATAGCTGTGTTTTCCATCCCAC
ATTCCCCTCACTATTGGTTATCGGCTGTTATGAGACTTTGGAGCTCTGGA
ACATGACTGAAAACAGACACTGACTCTGAGTGCACACGACAAGCTTGTAT
CATCTTT
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