FC932499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: Y163_SYNY3 (Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis sp. (strain PCC 6803) GN=sll0163 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 54/209 (25.84%), Postives = 87/209 (41.63%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN---GSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY-LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELW 649 +TL W+ V FSP L TS D T R+W+ +L GH+ V + +F+ +L + + R W + G C G S +F P I+ + + + D+ +Q C L+GH+N V++ W+ G++ + S SD RVWS G+C+ L + H F ++ T LW Sbjct: 1090 ATLRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNFAGEQLTL--CQGHADWVRNAEFN-CHGQILLTASRDGTARLWDLEGREIGLCQG---HTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQ-CFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWS----RHGKCLGTLRGHDHNIHGARFSLDGQKIVTYSTDNTARLW 1287
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 51/173 (29.48%), Postives = 83/173 (47.98%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGAT-QMRFQPRLGRILA-AAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVW 514 LW ++FT + + D +FSP + DR R+W T++ LR F GH V +HP+ + + + + +R W + NG+C +F G + F P GR LA A + + + D+ + +L+GH + V S+ ++ GE LAS S D VR+W Sbjct: 570 LWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVNCTRYHPN-SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 63/225 (28.00%), Postives = 102/225 (45.33%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENY-ISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIG-----SGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIG-----CYETL 640 LW +L T + VRF+ S + S ++R+WD E LRT GH V SLDFHP E + S ++ I+ W + C +K + A + +RF P G+ LA+A +++ + + D+ +L HK V+ + ++ + LAS S D VR W + ++GE I + + C+F SL V G C++T+ Sbjct: 47 LWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKI-LRTLMGHKANVSSLDFHPYGE-FVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPD-GKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGWEPDQCFDTV 268
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 53/221 (23.98%), Postives = 98/221 (44.34%), Query Frame = 2 Query: 11 CTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 C +F + L +T+V + + S T S DRT +VWDT + + L T GH V ++ F+ D + + + + WS G C F+ + + F P+ + +++ + D+++ + L GH ++ S+ ++TSG+ + + S D V VW +G K +H L + S +F +L +T LW+ T + Sbjct: 78 CDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGE-ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK---VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGK 294
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 54/210 (25.71%), Postives = 96/210 (45.71%), Query Frame = 2 Query: 62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSK-----GECIHELSCTGNKFHSCVFHPTFPSLLVIGCYE-TLELWNMTENR 667 +T+V + S S T S DRT ++WDT + + L T GH V ++ F+ D + + + + WS+ G C F+ + + F P+ + +++ + D++ L+GH ++ S+ +NTSG+ + + S D V VW +G K G C S + N C SL++ G + T +LW+ T + Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGE-ELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN--WDC-------SLILTGSMDKTCKLWDATNGK 294 HSP 2 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 51/240 (21.25%), Postives = 92/240 (38.33%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEI-----------------------------------------RYWSINNGSCAGVFKCQSGATQMRFQPRLGRILA-AAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEY-LASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFH 595 LW E+ T T I + F+P + +AT S D T ++WD +N + + T GHS ++SL F+ S + ++ +++ + + W NG C G+++A A+ + I T+ C KL+GH+ ++ + +N G + L SD+ R+W G+C+ L ++ SC F+ Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE-EVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIW---DAQTGQCLQVLEGHTDEIFSCAFN 396
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 50/204 (24.51%), Postives = 93/204 (45.59%), Query Frame = 2 Query: 62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 +T+V + S S T S DRT ++WDT + + L T GH V ++ F+ D + + + + WS+ G C F+ + + F P+ + +++ + D+++ L GH ++ S+ +NTSG + + S D V VW +G K ++ L + S VF+ +L +T +LW+ + Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGE-ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK---VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGK 294 HSP 2 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 54/258 (20.93%), Postives = 94/258 (36.43%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKE-----------------------------------------DLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILA-AAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSG-EYLASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELW 649 LW E+ T T I + F+P + +AT S D T ++WD ++ + + T TGHS ++SL F+ S L+ + + + W NG C G+++A A+ + I T+ C KL+GH+ ++ + +N G L SD+ R+W G+C+ L ++ SC F+ ++ T +W Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE-EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW---DAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 45/172 (26.16%), Postives = 83/172 (48.26%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVW 514 +W T +L + W+ +FSP + ++S D+TV++WD + + + ++ H V +DFHPS + + +N+ ++ W ++ S A + F P ++ A+ ++ + ILD+ L GH+ +V ++ +GEY AS SDE V VW Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE-CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT-VKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298 HSP 2 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 52/204 (25.49%), Postives = 88/204 (43.14%), Query Frame = 2 Query: 62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDE-LVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 +T V FS + LA+ S D T+ +W + + R FTGH V ++F PS LL S + +R W N + VF+ + + + F ++ A+ + + + Q L H N V ++ G + S SD+ V++W + ECIH G FHP+ + G T+++W+ +R Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPSGH-LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW---DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHR 220
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 51/174 (29.31%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 8 WCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENY-ISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSI 520 W SFT + + D+ SP A+ S DRT R+W + Y LR + GH V + FHP+ + L + + +R WS G+ +F G + F P G+ LA+A E+ + + D+ + +L+GH + + S+ ++ +AS S D VRVW I Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN-GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539 HSP 2 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 38/129 (29.46%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 71 VRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSV 454 V+F P+ + LAT S D+TVR+W + + S+R FTGH V+SL F P+ + L S + ++ W + +G+ + + T + F P G I +A+++N + + D+ C G +++ V Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGV 558
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 58/223 (26.01%), Postives = 93/223 (41.70%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 LW +L T + VR + + S ++RVWD E LRT GH + SLDFHP E + S ++ I+ W I C ++ S A + +RF P + +AA ++ + + D+ + GH V+ V ++ + LAS SD +R W + CI S +F+P L GC ++L ++ R Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG---EPGPVRSVLFNPD-GCCLYSGCQDSLRVYGWEPER 263
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 58/223 (26.01%), Postives = 93/223 (41.70%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 LW +L T + VR + + S ++RVWD E LRT GH + SLDFHP E + S ++ I+ W I C ++ S A + +RF P + +AA ++ + + D+ + GH V+ V ++ + LAS SD +R W + CI S +F+P L GC ++L ++ R Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI-LRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG---EPGPVRSVLFNPD-GCCLYSGCQDSLRVYGWEPER 263 The following BLAST results are available for this feature:
BLAST of FC932499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932499 ID=FC932499; Name=FC932499; organism=Citrus clementina; type=EST; length=707bpback to top |