FC932499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 50/178 (28.09%), Postives = 86/178 (48.31%), Query Frame = 2 Query: 14 TESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ----MRFQPRLGRILAA-AVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSG 529 T +F L T+ + V+FSP S LA+ SADRTV +WD + T GHS V + ++P+ L + D++S ++ W G+C + +G T F G +LA+ + + + + DV + C ++ H + V S ++ G + + S D L+R+W +G Sbjct: 27 TVAFRCTHALSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAAT-GARVNTLAGHSCGVSDVAWNPNGRYLATAADDHS-LKLWDAETGAC---LRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTG 199
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 62/225 (27.56%), Postives = 102/225 (45.33%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENY-ISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIG-----SGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIG-----CYETL 640 LW +L T + VRF+ + + S ++RVWD E LRT GH V SLDFHP D + S ++ I+ W + C +K + A + +RF P G+ LA+A +++ + + D+ +L HK V+ + ++ + LAS S D VR W + ++GE I + + C+F +L V G C++T+ Sbjct: 47 LWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKI-LRTLMGHKANVCSLDFHP-YGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPD-GKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRDALRVYGWEPDQCFDTV 268
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: CIAO1_MOUSE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus GN=Ciao1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 60/216 (27.78%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 5 LWCTE--SFTVKSTLEERTQ-WITDVRFSPSLSRLATSSADRTVRVWDTENPDYS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG---SCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQ--VCRLKLQGHKNQVHSVCWNTSGEYLASVSDE-LVRVW------------SIGSGSKGECIHELSCTGNKFHS 583 +W TE S+ KS L E Q + V +SP + LA++S D T +W D+ + T GH V S+ + PS +LL +C + + W ++ C V + + + P + +A+ ++ + + E VC L+GH++ V S+ ++ SG+ LAS SD+ VR+W GS +CI CT + FH+ Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI----CTLSGFHT 252
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: CIAO1_HUMAN (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Homo sapiens GN=CIAO1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 61/216 (28.24%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 5 LWCTE--SFTVKSTLEERTQ-WITDVRFSPSLSRLATSSADRTVRVWDTENPDYS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG---SCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQ--VCRLKLQGHKNQVHSVCWNTSGEYLASVSDE-LVRVW------------SIGSGSKGECIHELSCTGNKFHS 583 +W TE S+ KS L E Q + V +SP + LA++S D T +W D+ + T GH V S+ + PS +LL +C + + W ++ C V + + + P + +A+ ++ + + E VC L+GH++ V S+ ++ SG+ LAS SD+ VR+W GS +CI CT + FHS Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI----CTLSGFHS 252
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TBL1Y_HUMAN (F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens GN=TBL1Y PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 55/206 (26.70%), Postives = 94/206 (45.63%), Query Frame = 2 Query: 2 VLWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQM---------RFQPRLGRILAAA-VENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSC 586 ++W + K + DV + +++ A+ S D + V D+ ++TF GH+ V ++ + PS LL SC ++ ++ WS+ +C + S P +LA+A ++ + + DVE VC L H+ V+SV ++ G+YLAS S D+ V +W+ SGS +H TG F C Sbjct: 301 IIWDAHTGEAKQQFPFHSAPALDVDWQNNMT-FASCSTDMCIHVCRL-GCDHPVKTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGS---LVHSYQGTGGIFEVC 500
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NUDF_GIBZE (Nuclear distribution protein PAC1 OS=Gibberella zeae GN=PAC1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 54/178 (30.34%), Postives = 81/178 (45.51%), Query Frame = 2 Query: 32 KSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDF-HPSKEDLLCSCDNNSEIRYWSINN------------GSCAGVFKCQSGATQMRFQPRLGRILAAAVENY-ISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASV-SDELVRVWSI 520 + L+ I V F P S +A+ D T+++WD E + RT GH+ V+ LD+ P LL SC ++ I+ W N S + V SGA P G +LA+A + + I DV T C ++GH + + V + G+YL S +D VR+W I Sbjct: 111 RHVLQSHRTPINCVAFHPIFSSIASGDEDATIKIWDWEFGELE-RTVKGHTKAVLDLDYGGPKGHTLLASCSSDLTIKLWDPANEYQNIRTLPGHDHSVSAVRFIPSGAPG---APLSGNLLASASRDVTVRIWDVTTGYCVKTIRGHADWIRDVSPSLDGKYLLSTGNDRTVRLWDI 284
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 98 LATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHEL 556 + + S DRT++VWD ++ + T GH++TV + H SK + S ++ +R W I GSC V A + +++ +L I++ A + + I E Q C LQGH N+V+S+ ++ G ++ S S D +RVW + +G+ C H L Sbjct: 1048 IISGSTDRTLKVWDMDS-GACVHTLQGHTSTVRCMHLHGSK---VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKL--IVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGN---CKHTL 1191
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: CIAO1_RAT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Rattus norvegicus GN=Ciao1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 59/216 (27.31%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 5 LWCTE--SFTVKSTLEERTQ-WITDVRFSPSLSRLATSSADRTVRVWDTENPDYS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG---SCAGVFKCQS-GATQMRFQPRLGRILAAAVENYISILDVETQ--VCRLKLQGHKNQVHSVCWNTSGEYLASVSDE-LVRVW------------SIGSGSKGECIHELSCTGNKFHS 583 +W TE S+ KS L E Q + V +SP + LA++S D T +W D+ + T GH V S+ + PS +LL +C + + W ++ C V + + + P + +A+ ++ + + E VC L+GH++ V S+ ++ SG+ LAS SD+ VR+W GS +C+ CT + FH+ Sbjct: 42 IWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCV----CTLSGFHT 252
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 50/184 (27.17%), Postives = 86/184 (46.74%), Query Frame = 2 Query: 50 RTQWITDVRFSPSLSRLATSSADRTVRVWD--TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVW------SIG-SGSKGECIHELSCTGN 571 R ++ + FSP L T + DR +++WD T+ Y F+GH + SLDF + + S + R W + G C + ++G T + P I +++ I + V + +L+GHK V+S+ ++ L S S D+ ++VW S+G S K E I + + TG+ Sbjct: 359 RDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRY---VFSGHEQDIYSLDFSHNGR-FIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE-RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGH 537
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 2 Query: 32 KSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSI 520 +S+ E ++ V FSP LAT D+ +R+WD R TGH + SLDF + L+ S + + W + G + G T + F P I A +++ I I + +L GH+ V+SV ++ G+YL S S D +++W + Sbjct: 327 ESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRV-YRLLTGHEQEIYSLDFSKDGKTLV-SGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVE-QLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 487 The following BLAST results are available for this feature:
BLAST of FC932499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932499 ID=FC932499; Name=FC932499; organism=Citrus clementina; type=EST; length=707bpback to top |