FC932499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NUDF_ASPFU (Nuclear distribution protein nudF homolog OS=Aspergillus fumigatus GN=nudF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 2 Query: 41 LEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDF-HPSKEDLLCSCDNNSEIRYWSINNG------------SCAGVFKCQSGATQMRFQPRLGRIL-AAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDELV-RVWSIGS 526 LE +T V F P S LA+ S D T+++WD E + RT GH+ V+ +D+ P LL SC ++ I+ W ++ S + V SGA P G +L +A+ + + I DV T C L GH + V +V + G +L + D+ + R+W + S Sbjct: 111 LEGHRNPVTCVAFHPVFSSLASGSDDTTIKIWDWELGELE-RTVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAG---SPMSGNLLVSASRDKTLRIWDVTTGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSS 283 HSP 2 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 60/251 (23.90%), Postives = 107/251 (42.63%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSL--SRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPS-------KEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISIL-DVETQVCRLKLQGHKNQVHSVC---------------------WNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTE 661 +W E ++ T++ T+ + DV + + LA+ S+D T+++WD + ++RT GH +V S+ F PS +LL S + +R W + G C + GR L AA ++ I L D+ + + GH++ + V ++S E+ A+ S D+ +R+W S+G I L N + FHP LL + +T+ W++T+ Sbjct: 141 IWDWELGELERTVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVTTGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSSAETKSTFLGHEHVIECVAIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLWD----SRGNLIKTLVGHDNWVRALAFHPGGKHLLSVADDKTIRCWDLTQ 387
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 49/185 (26.49%), Postives = 80/185 (43.24%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ-MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSIGSGSKGECIHE 553 +W +L T I ++ S + S ++RVWD E LRT GH + SLDFHP + S +++I+ W + C +K + A + +RF P + +AA ++ + + D+ + GH V+ V ++ S LAS SD +R W + CI E Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKI-LRTLLGHKANICSLDFHP-YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEE 229
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: COPA_YEAST (Coatomer subunit alpha OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 58/222 (26.13%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLK--LQGHKNQVHSVCWNTSGEYLASVSDE-LVRVWSIGSGSKGECIHELSCTG--NKFHSCVFHPTFPSLLVIGCYETLELWNM 655 +W ++ TL ++ V F L + ++S D+T+R+W+ +N + TGH+ VM FHP+ +DL+ S + IR W I +G+ K S F+ ++ +A +N +LD C +K L+GH V+ ++ + + S SD+ V++W + + E +C G N S +FHP ++ +G +TL +W++ Sbjct: 79 VWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRK-EIACLTGHNHFVMCAQFHPT-DDLIVSASLDETIRIWDI-----SGLRKRHSAPGTSSFEEQM-----SAQQN---LLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVD---TCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL 282
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWD--TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG-----SCAGVFKCQSGAT--QMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDELVRVWSIGSG 529 S+LE ++ + V FSP+ LA+ S D TVR WD TE P + T GH V+S+ + P + L C N +I W + G + AG K +G + + P + +++ + + I D C L GH V + W G ++ D ++VW G Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF---TCKGHRHWVLSISWSPDGKKLASGC-KNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWD--TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG-----SCAGVFKCQSGAT--QMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVSDELVRVWSIGSG 529 S+LE ++ + V FSP+ LA+ S D TVR WD TE P + T GH V+S+ + P + L C N +I W + G + AG K +G + + P + +++ + + I D C L GH V + W G ++ D ++VW G Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF---TCKGHRHWVLSISWSPDGKKLASGC-KNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: WDR69_MACFA (WD repeat-containing protein 69 OS=Macaca fascicularis GN=WDR69 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 51/206 (24.76%), Postives = 96/206 (46.60%), Query Frame = 2 Query: 62 ITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSG-ATQMRFQPRLGRILAAAVENYISILDVET--QVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTENR 667 +T+V + S S T S DRT ++WDT + + L T GH V ++ F+ D + + + WS+ G C F+ + + F P+ + +++ + +++ +VC L+ GH ++ S+ +NTSG+ + + S D V VW +G K ++ L + S +F+ +L +T LW+ T + Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGE-ELNTLEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGEEVCTLR--GHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGK---VNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNGK 294 HSP 2 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 50/219 (22.83%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF--KCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLASVS-DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWN 652 LW E+ T T I + F+P + +AT S D T ++W+ +N + + T GHS ++SL F+ S + ++ +++ + W + G + C ++ + F IL +++ + D C L GH +++ C++ +G+ +A+ S D R++ S + +CI +L + F+P LL +T +W+ Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGE-EVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVV-VWDADTGGKVNILIGHCAEISSAL-FNWDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF---SAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQ----MRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSI 520 + L++ + TDV FSP LAT+SADRT ++W T+ L+TF GH + + FHPS + L + + R W IN G+ Q G ++ + FQ + +++ + D+ T L QGH V SV ++ +G +LAS D R+W + Sbjct: 292 AVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGT--LLQTFEGHLDRLARVAFHPSGK-YLGTTSYDKTWRLWDINTGA---ELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: NUDF_EMENI (Nuclear distribution protein nudF OS=Emericella nidulans GN=nudF PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 51/245 (20.82%), Postives = 107/245 (43.67%), Query Frame = 2 Query: 5 LWCTESFTVKSTLEERTQWITDVRFSPSLSR--LATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGR--ILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCW--NTSGEYLASVS--------------------DELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTFPSLLVIGCYETLELWNMTE 661 +W E ++ TL+ + ++ + + LA+ S+D T+++WD ++RT +GH +V S+ F S ++ L S + +R W ++ G C V K + + P +++ + I++ +V + + L GH+N + + S E+LA+++ D+ +++W ++G I L N VFHP L + +T+ W++++ Sbjct: 140 IWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKLWE----ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 47/219 (21.46%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKE--DLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSIGS-GSKGECIHELSCTGNKFHS----CVFHPTFPSLLVIGCYETLELWNMTENR 667 +TL+ + + ++ ++ S L ++S D+TV VWD+E + ++ GH++ V S +P++ L+C+ ++ ++ W I + F+ + F +I++ ++N I + D+ ++GH + V + ++ G YL S D VRVW + K C+ + F C + P + + +W+ T R Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE-RVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRR 319
BLAST of FC932499 vs. ExPASy Swiss-Prot
Match: SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 47/219 (21.46%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 35 STLEERTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKE--DLLCSCDNNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAVENYISILDVETQVCRLKLQGHKNQVHSVCWNTSGEYLAS-VSDELVRVWSIGS-GSKGECIHELSCTGNKFHS----CVFHPTFPSLLVIGCYETLELWNMTENR 667 +TL+ + + ++ ++ S L ++S D+TV VWD+E + ++ GH++ V S +P++ L+C+ ++ ++ W I + F+ + F +I++ ++N I + D+ ++GH + V + ++ G YL S D VRVW + K C+ + F C + P + + +W+ T R Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE-RVKRLKGHTSFVNSC--YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRR 319 The following BLAST results are available for this feature:
BLAST of FC932499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932499 ID=FC932499; Name=FC932499; organism=Citrus clementina; type=EST; length=707bpback to top |