FC932500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_OCHA4 (50S ribosomal protein L2 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 53/142 (37.32%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 289 NNTAY----RYQSSETELVGDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 N TA+ RY+ E + P++ V DK++ A ++ + G+ MPLA M +GTI+HN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+R Sbjct: 86 NRTAFIALIRYEDGELAYI------LAPQRLAVGDKVV---AGNSVDVKPGNAMPLASMPVGTIVHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVPGACFASVGAVSNPDHGNINDGKAGRSVWRGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_LACF3 (50S ribosomal protein L2 OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=rplB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 46/98 (46.94%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D + ++G+ +PL + +GT+IHNIE+ PG+GG+L R+AGTSA++L + + LVRL SG ++I CRATIG++ N HG KAG+SR+ G+R Sbjct: 121 DADIKVGNTLPLKNIPVGTVIHNIELKPGKGGQLTRSAGTSAQLLGK-EEKYVLVRLSSGEVRMILAACRATIGSIGNDEHGLLVKGKAGRSRYAGQR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACSK (50S ribosomal protein L2 OS=Bacillus clausii (strain KSM-K16) GN=rplB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D + + G+ +PLA + +GT+IHNIE+ PG+GG+LVR+AGT A++L + + LVRL SG + I + CRATIG V N H + KAG+SRW G R Sbjct: 121 DADIKTGNALPLANIPVGTVIHNIELRPGKGGQLVRSAGTEAQLLGK-EGDYALVRLNSGETRYILSTCRATIGQVGNVEHELINIGKAGRSRWKGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_STRU0 (50S ribosomal protein L2 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rplB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +IG+ +PLA + +GT+IHNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRATIG+V N + KAG++RW G R Sbjct: 125 KIGNALPLANIPVGTVIHNIEMKPGKGGELVRAAGASAQVLGQ-EGKYVLVRLQSGEVRMILGTCRATIGSVGNEQQSLVNIGKAGRNRWKGVR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RHOP2 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + ++RL SG ++L+ RC ATIG VSNP H + KAG++RWLG R Sbjct: 107 PQRLAVGDTVIAG-AYVDVKP--GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIMRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRTRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V D ++ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+R Sbjct: 107 PQRLGVGDSVV---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-HGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACSU (50S ribosomal protein L2 OS=Bacillus subtilis GN=rplB PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 397 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG ++I + CRA+IG V N H + KAG+SRW G R Sbjct: 117 MSGPEADIKVGNALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVLGK-EGKYVLVRLNSGEVRMILSACRASIGQVGNEQHELINIGKAGRSRWKGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACHD (50S ribosomal protein L2 OS=Bacillus halodurans GN=rplB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 ++G+ +PL + +GT+IHNIE+ PG+GG+LVR+AG A++L + + LVRL SG + I CRATIG V N H + KAG+SRWLG+R Sbjct: 125 KVGNALPLKNIPVGTVIHNIELKPGKGGQLVRSAGAEAQLLGK-EGDYVLVRLNSGETRYILATCRATIGQVGNLEHELVNIGKAGRSRWLGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RICTY (50S ribosomal protein L2 OS=Rickettsia typhi GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19 Identity = 47/115 (40.87%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+K ++ D+++ A DI +IG+C+PL + IGT +HN+E+ G+GG++ R+AGTS +++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG R Sbjct: 107 PQKLSIGDRVISSQA-ADI--KIGNCLPLKSIPIGTTLHNVEMKVGKGGQIARSAGTSVELVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RHISN (50S ribosomal protein L2 OS=Rhizobium sp. (strain NGR234) GN=rplB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19 Identity = 47/115 (40.87%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+R Sbjct: 107 PQRLAAGDKVIASDKAVDVKP--GNTMPLQFIPVGSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKR 218 The following BLAST results are available for this feature:
BLAST of FC932500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932500 ID=FC932500; Name=FC932500; organism=Citrus clementina; type=EST; length=712bpback to top |