FC932500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_LACDB (50S ribosomal protein L2 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 VD + ++G+ +PL + GT +HNIE+ PG+GG++ R+AGTSA++L + VRL SG + I + CRATIG V N H + KAG+SRW+G+R Sbjct: 120 VDADIKVGNALPLKNIPTGTEVHNIELKPGKGGQIARSAGTSAQVL-GVDGKYTQVRLQSGEVREILSECRATIGAVGNEQHSLINIGKAGRSRWMGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_LACDA (50S ribosomal protein L2 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 VD + ++G+ +PL + GT +HNIE+ PG+GG++ R+AGTSA++L + VRL SG + I + CRATIG V N H + KAG+SRW+G+R Sbjct: 120 VDADIKVGNALPLKNIPTGTEVHNIELKPGKGGQIARSAGTSAQVL-GVDGKYTQVRLQSGEVREILSECRATIGAVGNEQHSLINIGKAGRSRWMGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_HALOH (50S ribosomal protein L2 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D + G+ + L + +GTIIHNIE+ PG+GG+L RAAGT A+IL + + ++LPSG +LI C+ATIG V N H + KAG+ RWLG+R Sbjct: 121 DAEIKPGNALKLKNIPVGTIIHNIELKPGKGGQLARAAGTMAQILAK-EGKYAHIKLPSGEVRLISLECKATIGQVGNIDHENISIGKAGRKRWLGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_AZOC5 (50S ribosomal protein L2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 47/113 (41.59%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLG 696 P++ V DK++ A ++ + G+ PL+ + +GTI+HN+E+ G+GG++ R+AG+ A+I+ + +VRL SG ++LI C AT+G VSNP H L KAG+SRWLG Sbjct: 107 PQRLAVGDKVI---AGEQVDVKPGNAAPLSNLPVGTIVHNVEMKIGKGGQIARSAGSYAQIVGRD-QGYVIVRLNSGEQRLIHGACYATVGAVSNPDHMNTSLGKAGRSRWLG 215
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RK2_ZYGCR (50S ribosomal protein L2, chloroplastic OS=Zygnema circumcarinatum GN=rpl2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+ ++ D+I+ H I+ G+ +PL M +GT IHNIE+ PG+GG++ RAAG AKI+ + F +RLPSG +L+ +C ATIG V N + + KAG RWLGRR Sbjct: 107 PRGISIGDQILSD-THAPISP--GNALPLTNMPLGTTIHNIELQPGKGGQVARAAGAIAKIIAK-EGKFATLRLPSGEVRLVLQQCLATIGQVGNVDANNQSIGKAGSKRWLGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RICFE (50S ribosomal protein L2 OS=Rickettsia felis GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 45/115 (39.13%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+K +V D+++ D + +IG+C+PL + GT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG R Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKFIPTGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BRUME (50S ribosomal protein L2 OS=Brucella melitensis GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 46/115 (40.00%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+R Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_SYNFM (50S ribosomal protein L2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18 Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKIL-KEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 G+C+ LA M +GTIIHN+E+ PG+GG+L R+AG+S +++ KE T + ++RLPS +++ C+AT+G V N H L KAG+ RWLG+R Sbjct: 127 GNCLRLANMPLGTIIHNVELKPGKGGQLARSAGSSIQLIAKEGTHA--ILRLPSSEMRMVPISCKATVGQVGNIDHENLSLGKAGRKRWLGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_STAHJ (50S ribosomal protein L2 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18 Identity = 44/98 (44.90%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D + ++G+ +PL + +GT+IHNIE+ PG+GG+L R+AG S+++L + + L+RL SG ++I + CRATIG V N H + KAG+SRW G R Sbjct: 121 DADIKVGNALPLQNIPVGTVIHNIELKPGKGGQLARSAGASSQVLGK-EGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_STAAW (50S ribosomal protein L2 OS=Staphylococcus aureus (strain MW2) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18 Identity = 46/107 (42.99%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 382 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +I+ A DI ++G+ +PL + +GT++HNIE+ PG+GG++ R+AG SA++L + + L+RL SG ++I + CRATIG V N H + KAG+SRW G R Sbjct: 114 QIVESGAEADI--KVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGASAQVLGK-EGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIR 217 The following BLAST results are available for this feature:
BLAST of FC932500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932500 ID=FC932500; Name=FC932500; organism=Citrus clementina; type=EST; length=712bpback to top |