FC932500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_STRP2 (50S ribosomal protein L2 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 ++G+ +PLA + +GT+IHNIE+ PG+GG+LVRAAG SA++L + LVRL SG ++I CRAT+G V N HG L KAG+SRW G R Sbjct: 125 KVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLGS-EGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_HYDS0 (50S ribosomal protein L2 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 G+ MPL + +GT IHNIE+NPG+G KLVRAAG SA+++ + + VRLPSG +LI+ +C ATIG V H KL KAG+SRWLG R Sbjct: 137 GNAMPLRFIPVGTFIHNIELNPGRGAKLVRAAGLSAQVIGK-IEGYAQVRLPSGEVRLINDKCMATIGVVGLAEHELVKLGKAGRSRWLGMR 227
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 289 NNTAY----RYQSSETELVGDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 N TA+ +YQ E + P++ V D I+ +VD+ G+ MPL M +GTI+HNIEV G+GG+L R+AGT A+++ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRR Sbjct: 86 NRTAFIALVKYQDGELAYI------LAPQRLAVGDTIVAGN-YVDVKP--GNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V D ++ +VD+ G+ MPL M +GTIIHNIEV G+GG+L R+AGT A+++ + ++RL SG ++L+ RCR TIG VSNP H + KAG++RWLGR+ Sbjct: 107 PQRLAVGDSVVAGN-YVDVKP--GNVMPLGNMPVGTIIHNIEVKIGKGGQLARSAGTYAQLVGRD-QDYVIIRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRNRWLGRK 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+SRWLGR+ Sbjct: 107 PQRLAVGDTVLAG-AYVDVKP--GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRSRWLGRK 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_PORGI (50S ribosomal protein L2 OS=Porphyromonas gingivalis GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20 Identity = 45/94 (47.87%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 ++G+ +PLA + +GTIIHNIE+ PGQG K+VR+AG+ A++ ++ ++++PSG + I + C+ATIG+V N H +K KAG+SRWLGRR Sbjct: 125 EVGNALPLANIPVGTIIHNIELRPGQGAKMVRSAGSFAQLTSRE-GTYVVIKMPSGEVRRILSTCKATIGSVGNSDHALEKSGKAGRSRWLGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_PORG3 (50S ribosomal protein L2 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20 Identity = 45/94 (47.87%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 ++G+ +PLA + +GTIIHNIE+ PGQG K+VR+AG+ A++ ++ ++++PSG + I + C+ATIG+V N H +K KAG+SRWLGRR Sbjct: 125 EVGNALPLANIPVGTIIHNIELRPGQGAKMVRSAGSFAQLTSRE-GTYVVIKMPSGEVRRILSTCKATIGSVGNSDHALEKSGKAGRSRWLGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_PARD8 (50S ribosomal protein L2 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20 Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D ++G+ +P+A + +GTIIHNIE+ PGQG K+VR+AG A++ + ++ ++++PSG + I C+ATIG V N H +K KAG+SRWLGRR Sbjct: 121 DAAPEVGNTLPMANIPVGTIIHNIELRPGQGAKMVRSAGAFAQLTSKE-GAYAIIKMPSGETRKILAACKATIGAVGNSDHALEKSGKAGRSRWLGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_MAGSM (50S ribosomal protein L2 OS=Magnetococcus sp. (strain MC-1) GN=rplB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.492e-20 Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 334 GDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 G+ S P++ V D ++ +++ + G+CMPL M IGTIIHN+E+ PG+GG++ R+AG +++ + + +++PSG +L+ C AT+G VSNP + K+ KAG++RW+G+R Sbjct: 99 GEKSYILAPQRLQVGDTVVSAKTLDNVDVKPGNCMPLRVMPIGTIIHNVELKPGKGGQVARSAGNYIQLMGK-EGKYAQLKMPSGEMRLVLLECMATVGMVSNPDNSNTKIGKAGRTRWMGKR 220
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_LACSS (50S ribosomal protein L2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.492e-20 Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 V+ + ++G+ +PLA + GT+IHNIE+ PG+GG+LVR+AGTSA++L + + +VRL SG ++I CRAT+GTV N H K+ KAG+ RW+G R Sbjct: 120 VNADIKVGNALPLANIPDGTLIHNIELKPGKGGQLVRSAGTSAQLLGK-EGKYAIVRLTSGETRMILLTCRATVGTVGNGQHELIKIGKAGRKRWMGIR 217 The following BLAST results are available for this feature:
BLAST of FC932500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932500 ID=FC932500; Name=FC932500; organism=Citrus clementina; type=EST; length=712bpback to top |