FC932500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RICPU (50S ribosomal protein L2 OS=Rickettsia peacockii (strain Rustic) GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 47/115 (40.87%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG R Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 47/115 (40.87%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG R Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 47/115 (40.87%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG R Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ +V D ++ ++VD+ G+ MPL M +GTI+HNIE+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+ RWLGRR Sbjct: 107 PQRLSVGDSVIAG-SYVDVKP--GNVMPLGNMPVGTIVHNIELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRKRWLGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_PERMH (50S ribosomal protein L2 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 397 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +A D ++G+ +PL + +GT IHNIE+ PG+GG+LVRAAG SA+IL + VRLPSG +LI +C AT+GTV H KL KAG++RWLG R Sbjct: 117 VAGPDAEIKVGNALPLENIPVGTFIHNIELTPGKGGQLVRAAGMSAQILGR-QGDYVQVRLPSGEIRLIHKKCMATVGTVGLAEHELIKLGKAGRARWLGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_ENTFA (50S ribosomal protein L2 OS=Enterococcus faecalis GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 46/105 (43.81%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 MR ++ + + ++G+ +PL + +GT+IHNIE+ PG+GG+L+R+AGTSA++L + + L+RL SG ++I CRATIG+V N H + KAG+SRW+ +R Sbjct: 114 MRLVSGPEADIKVGNALPLENIPVGTVIHNIEMKPGKGGQLIRSAGTSAQVLGK-EGKYVLIRLNSGEVRMILATCRATIGSVGNEQHELINIGKAGRSRWMRKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACV8 (50S ribosomal protein L2 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +IG+ +PL + +GT+IHNIE+ PGQG LVR+AG A++ +C+++LPSG + I + C+ATIG+V N HG + KAG++RW+GRR Sbjct: 125 EIGNALPLENIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSRE-GKYCVIKLPSGEVRQILSACKATIGSVGNSDHGLESSGKAGRTRWMGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACTN (50S ribosomal protein L2 OS=Bacteroides thetaiotaomicron GN=rplB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +IG+ +PL + +GT+IHNIE+ PGQG LVR+AG A++ +C+++LPSG + I + C+ATIG+V N HG ++ KAG+SRW GRR Sbjct: 125 EIGNTLPLQNIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSRE-GKYCVIKLPSGEVRQILSTCKATIGSVGNSDHGLERSGKAGRSRWQGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_MACCJ (50S ribosomal protein L2 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 ++G+C+PL + +GT+IHNIE+ PG+GG+LVR+AG SA++L + + LVRL SG ++I + CRATIG V N H + KAG+SRW G R Sbjct: 125 KVGNCLPLQNIPVGTVIHNIELKPGKGGQLVRSAGASAQVLGK-EGKYVLVRLKSGEVRMILSTCRATIGQVGNEQHELINIGKAGRSRWKGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_GEOTN (50S ribosomal protein L2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 M M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + ++RL SG ++I +CRAT+G V N H + KAG++RWLG R Sbjct: 114 MEIMSGPNADIKVGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGK-EGKYVIIRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLGIR 217 The following BLAST results are available for this feature:
BLAST of FC932500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932500 ID=FC932500; Name=FC932500; organism=Citrus clementina; type=EST; length=712bpback to top |