FC932500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BREBN (50S ribosomal protein L2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 54/115 (46.96%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P V D+I+ + D + +IG+ +P+ + +GT IHNIE+ PG+GG+LVRAAGTSA++L F +VRL SG + I CRATIG V N H + KAG+SRWLG R Sbjct: 107 PHNLKVGDQIV---SGADADIKIGNALPMEKIPVGTTIHNIELKPGKGGQLVRAAGTSAQLLGR-DGEFVIVRLSSGETRRIHNVCRATIGQVGNLDHELLNIGKAGRSRWLGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACFR (50S ribosomal protein L2 OS=Bacteroides fragilis GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +IG+ +PL + +GT+IHNIE+ PGQG LVR+AG A++ +C+++LPSG + I + C+ATIG+V N HG + KAG+SRW GRR Sbjct: 125 EIGNALPLQNIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSRE-GKYCVIKLPSGEVRQILSTCKATIGSVGNSDHGLESSGKAGRSRWQGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_BACFN (50S ribosomal protein L2 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 +IG+ +PL + +GT+IHNIE+ PGQG LVR+AG A++ +C+++LPSG + I + C+ATIG+V N HG + KAG+SRW GRR Sbjct: 125 EIGNALPLQNIPVGTVIHNIELRPGQGAALVRSAGNFAQLTSRE-GKYCVIKLPSGEVRQILSTCKATIGSVGNSDHGLESSGKAGRSRWQGRR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_EXISA (50S ribosomal protein L2 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19 Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 M M+ + + ++G+ +PL + +GT IHNIE+ PG+GG+LVRAAG SA+I + + +VRL SG +L CRATIG+V N H + KAG+SRWLG+R Sbjct: 114 MEIMSGPEADIKVGNALPLVNIPVGTTIHNIELKPGKGGQLVRAAGASAQI-QGRDGKYVIVRLQSGESRLFLGTCRATIGSVGNEEHELVNIGKAGRSRWLGKR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_SULSY (50S ribosomal protein L2 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.327e-19 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 397 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 MA D ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAG SA+IL + +RLPSG +L+ +C ATIG V H +L KAG+SRWLG R Sbjct: 117 MAGPDAEIKVGNALPLENIPVGTLVHNIELTPGKGGQLVRAAGMSAQILGR-EGDYVQIRLPSGELRLVYKKCMATIGAVGLAEHELLELGKAGRSRWLGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_CARHZ (50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.327e-19 Identity = 47/102 (46.08%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 397 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 M+ D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAGT+A++L + + ++RLPSG + + CRATIG V N H + KAG++RWLG R Sbjct: 117 MSGPDADIKVGNALPLANIPVGTLVHNIELYPGKGGQLVRAAGTAAQLLGK-EGRYAILRLPSGEMRKVLLECRATIGQVGNLEHENITIGKAGRARWLGIR 217
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_SINMW (50S ribosomal protein L2 OS=Sinorhizobium medicae (strain WSM419) GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 48/115 (41.74%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+R Sbjct: 107 PQRLAVGDKVIASEKAVDVKP--GNAMPLQFIPVGSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKR 218
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_RHIME (50S ribosomal protein L2 OS=Rhizobium meliloti GN=rplB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 48/115 (41.74%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 P++ V DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+R Sbjct: 107 PQRLAVGDKVIASEKAVDVKP--GNAMPLQFIPVGSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKR 218
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_SYNJA (50S ribosomal protein L2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 397 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 MA D ++G+ MPL + +GT++HN+E+ PG+GG++VRAAG A+++ + + ++LPSG ++I C ATIG V N H L KAG+SRWLGRR Sbjct: 123 MAGPDAPFELGNAMPLERIPLGTVVHNVELYPGRGGQIVRAAGAGAQVVAK-EGKYVSLKLPSGEVRMIRGECYATIGQVGNVDHSNLSLGKAGRSRWLGRR 223
BLAST of FC932500 vs. ExPASy Swiss-Prot
Match: RL2_STRE4 (50S ribosomal protein L2 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19 Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 409 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRR 702 D + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N + KAG+SRW G R Sbjct: 121 DADIKVGNALPLVNIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQ-EGKYVLVRLQSGEVRMILGTCRATVGTVGNEQQSLVNIGKAGRSRWKGIR 217 The following BLAST results are available for this feature:
BLAST of FC932500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932500 ID=FC932500; Name=FC932500; organism=Citrus clementina; type=EST; length=712bpback to top |