FC932527

Overview
NameFC932527
Unique NameFC932527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_GEOSL (Adenosylhomocysteinase OS=Geobacter sulfurreducens GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.687e-40
Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            ++ + D+S A +GR E+ +AE EMPGLMA R E+  ++P +GA+I GSLH+TIQTA+LIETL ALGAEVRW SCNIFSTQDH              +KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G  AE+
Sbjct:   15 DYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEK 157          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   ++P K  +ITGSLH+TIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   ++P K  +ITGSLH+TIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.877e-40
Identity = 90/174 (51.72%), Postives = 109/174 (62.64%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW---GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 660
            +A  R++ V D+  ADFGR EI +AE EMPGLMA RAE+G SQP KGA+ITGSLH+TIQTAVLIETLTALGAEVRW +CNIFSTQ+H               KGE+L +YW    +  DW     G   +LI+DDGGDAT+    G K     E    +P P + +  E Q  L
Sbjct:    5 AADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGRIFDWESDNDGRTANLILDDGGDATMFALWGAK----LEAGETMPPPENEEEVEMQRAL 174          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.877e-40
Identity = 87/176 (49.43%), Postives = 109/176 (61.93%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE------------------GVKAEEIYEKTGKLPDPASTDN 639
            +KVKD+S AD+GR EIELAE EMPGLMA R+++G  +P KGA+I G LH+TIQTAVLIETL  LGAEV W SCNIFSTQDH              WKG T +E+ WC E+ LD+  G   ++I+DDGGD T ++H+                  GV   E+  K+GKL  P+   N
Sbjct:   11 YKVKDISLADYGRKEIELAENEMPGLMALRSKYGAEKPLKGARIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGMTEEEFDWCIEQTLDFPSGEKLNMILDDGGDLTAMVHDRFPELLDNIYGISEETTAGVHRLEVLNKSGKLRVPSINVN 186          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.758e-40
Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KGA+I GSLH+T+QTA+LIETLTALGAEVRW SCNIFSTQDH               KGETL+EYW   +    W  G   ++I+DDGGDAT+ +  G KAE
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQDHAAAAIAETGVPVFATKGETLEEYWDYADAIFHWPDGETANMILDDGGDATMYLILGEKAE 150          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_PROM4 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40
Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            A + S Q+  +  E+++ D+  A+FGR E+ +AE EMPGLMA R ++   +P KGA+I GSLH+TIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG    P++I+DDGGDAT L+  G KAE+
Sbjct:    3 AASASTQQLHNHIEYEIADIELAEFGRKELAIAEKEMPGLMALREKYHKEKPLKGARIAGSLHMTIQTAVLIETLVALGAQVRWASCNIFSTQDHAAAAIASSGIPVFAKKGETLDEYWAYTHRILEWGDQETPNMILDDGGDATGLVILGSKAEQ 158          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.410e-40
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K  +ITGSLH+TIQTAVLIETL  +GA VRW SCNIFSTQDH              WKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.410e-40
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K  +ITGSLH+TIQTAVLIETL  +GA VRW SCNIFSTQDH              WKGETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC932527 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 84/142 (59.15%), Postives = 101/142 (71.13%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHVTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +F VKDLS ADFGR E+++AE EMPGLMA R EFG S+P KGA+I GSLH+T+QTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL++YW  T+K   +   G  ++I+DDGGDATL I  G + E
Sbjct:    3 DFIVKDLSLADFGRKELDIAETEMPGLMALREEFGASKPLKGARIAGSLHMTVQTAVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFAIKGETLEDYWAYTDKIFQFA-DGTCNMILDDGGDATLYILLGARVE 143          
The following BLAST results are available for this feature:
BLAST of FC932527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_GEOSL1.687e-4055.24Adenosylhomocysteinase OS=Geobacter sulfurreducens... [more]
SAHH_XANC52.203e-4053.55Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANAC2.203e-4053.55Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_SPHAL2.877e-4051.72Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_RHOBA2.877e-4049.43Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_MARMM3.758e-4055.48Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_PROM44.908e-4053.21Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_XANOP6.410e-4053.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM6.410e-4053.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_RHOSH8.371e-4059.15Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34209E10EF PostHarveN Citrus clementina cDNA clone C34209E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932527 ID=FC932527; Name=FC932527; organism=Citrus clementina; type=EST; length=689bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACGTGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATTCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGA
back to top