FC932530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932530 vs. ExPASy Swiss-Prot
Match: CHI2_COCP7 (Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 62/222 (27.93%), Postives = 98/222 (44.14%), Query Frame = 2 Query: 53 VSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKF---GNGQTPETNLAGHCNPA------------AGGCRVVSDAIKSCQS*GIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 652 VS L SL +A+YWGQ + L+ C + + + F+N F G P +N C + GC + + + C++ G ++ + A N AD+LW F T + RP G A +DG DFDIE+GS + + R L + + Y++AAPQC PD++L A++ FD++++QFYN Sbjct: 13 VSSLFIQSLALNPYAKSNLAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYN 234
BLAST of FC932530 vs. ExPASy Swiss-Prot
Match: CHI2_COCIM (Endochitinase 2 OS=Coccidioides immitis GN=CTS2 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 62/222 (27.93%), Postives = 98/222 (44.14%), Query Frame = 2 Query: 53 VSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKF---GNGQTPETNLAGHCNPA------------AGGCRVVSDAIKSCQS*GIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 652 VS L SL +A+YWGQ + L+ C + + + F+N F G P +N C + GC + + + C++ G ++ + A N AD+LW F T + RP G A +DG DFDIE+GS + + R L + + Y++AAPQC PD++L A++ FD++++QFYN Sbjct: 13 VSSLFIQSLALNPYAKSNLAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYN 234
BLAST of FC932530 vs. ExPASy Swiss-Prot
Match: CHLY_PARTH (Bifunctional chitinase/lysozyme (Fragment) OS=Parthenocissus quinquefolia PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 2 Query: 101 GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPETNLA 241 GGIAIYWGQNGNEGTLT TC TGKY+YVNIAFLNKFGNGQTPE NLA Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLA 47
BLAST of FC932530 vs. ExPASy Swiss-Prot
Match: YKT4_SCHPO (Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 61/216 (28.24%), Postives = 97/216 (44.91%), Query Frame = 2 Query: 56 SLLVTLSLIKASQGAGGIAIYWGQN-------GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPETNLAGHCNPA---AGG----CRVVSDAIKSCQS*GIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLA-RFLSAYSS-RGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNT 655 S + LSL +Q A + YWG N ++ L+S C Y + ++ + F P + + C+ + +G C + I+ CQ GIKV+ D N A +WN F G S RP G AV+DG D ++ +G+ + A R L Y+S +K Y++AAP C PD L A++ FD++ + +N+ Sbjct: 13 SARLALSLNLTNQTA--VLGYWGSNLAGKMGDRDQKRLSSYCQNTTYDAIILSSVIDFNVDGWPVYDFSNLCSDSDTFSGSELKKCPQIETDIQVCQENGIKVLLSIGGYNGNFSLNNDDDGTNFAFQVWNIFGSGEDSYRPFGKAVVDGFDLEVNKGTNTAYSAFAKRMLEIYASDPRRKYYISAAPTCMVPDHTLTKAISENSFDFLSIHTFNS 226 The following BLAST results are available for this feature:
BLAST of FC932530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932530 ID=FC932530; Name=FC932530; organism=Citrus clementina; type=EST; length=719bpback to top |