FC932532

Overview
NameFC932532
Unique NameFC932532
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2783 contig Ccv1_Contig2783:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_ORENI (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Oreochromis niloticus GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.132e-85
Identity = 148/213 (69.48%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + ++GT++ H+  VT IAT     DMI++ASRD+SII+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSG+WDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYTIQ+ + HTEWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTVRGTLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQD-EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_RAT (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Rattus norvegicus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_PIG (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Sus scrofa GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_MOUSE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus musculus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_MACFA (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca fascicularis GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_HUMAN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Homo sapiens GN=GNB2L1 PE=1 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_CHICK (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Gallus gallus GN=GNB2L1 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_BOVIN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Bos taurus GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 312.768 bits (800), Expect = 1.216e-84
Identity = 147/213 (69.01%), Postives = 173/213 (81.22%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M E + L+GT++ H   VT IAT     DMI++ASRD++II+W LT++E  YG+ +R L GHSHFV DVV+SSDGQFALSGSWDG LRLWDL  G + RRFVGHTKDVLSVAFS DNRQIVS SRD+TIKLWNTLG CKYT+Q+ ++H+EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGK
Sbjct:    1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 212          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 9.639e-82
Identity = 148/214 (69.16%), Postives = 170/214 (79.44%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKT-YGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            M+E L L+GT+  H   VT IAT   + D I++ASRD+++IVW LT++E T YG  ++RL GHSHF+ DVVLSSDG +ALSGSWD  LRLWDLA GK+ RRF GHTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECK+TIQE D HT+WVSCVRFSPN   P IVS  WDRTVKVWNL+NCKL+    GH GY+NTV VSPDGSLC SGGK
Sbjct:    1 MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQE-DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGK 213          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.066e-80
Identity = 138/213 (64.79%), Postives = 170/213 (79.81%), Query Frame = 1
Query:   73 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            MAE L+LKGT+  H   VT++AT ++N +M+++ SRD+S+I+W+LT++E +YG  +RRL GHSH V D V+SSDG +ALS SWD  LRLW+L+ G + RRFVGHT DVLSV+FS DNRQIVS SRDRTIKLWNTLG+CK+TI E   HTEWVSCVRFSPN   P IVS+ WD+ VKVW LS+CKL+    GHTGY+N V +SPDGSLCASGGK
Sbjct:    1 MAEQLILKGTLEGHNGWVTSLATSLENPNMLLSGSRDKSLIIWNLTRDETSYGYPKRRLHGHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKFTITE-KGHTEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLCASGGK 212          
The following BLAST results are available for this feature:
BLAST of FC932532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
GBLP_ORENI7.132e-8569.48Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_RAT1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_PIG1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MOUSE1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MACFA1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HUMAN1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_CHICK1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_BOVIN1.216e-8469.01Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_DROME9.639e-8269.16Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_NEUCR1.066e-8064.79Guanine nucleotide-binding protein subunit beta-li... [more]

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Properties
Property NameValue
Genbank descriptionC34209F03EF PostHarveN Citrus clementina cDNA clone C34209F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932532 ID=FC932532; Name=FC932532; organism=Citrus clementina; type=EST; length=723bp
GCTAGCTCGCCTCTCAAACCCTAACAGCAGGGGGGAAAAAAAAATACCGA
AAGTACATTTGCTATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAGGAA
CCATGCGCGCCCACACCGACATGGTAACGGCGATCGCCACCCCAATCGAC
AACTCTGACATGATCGTGACGGCCTCGCGTGACGAGTCCATCATTGTCTG
GCACCTCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGA
CCGGCCACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAG
TTCGCTCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGC
CGAGGGCAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCT
CCGTCGCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGAC
CGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCA
AGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCA
ACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAA
GTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACAC
TGGATACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCA
GTGGAGGGAAAAGATGTGTGATC
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