FC932532 | Citrus Genome Database

Overview


Name	FC932532
Unique Name	FC932532
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	723

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 64/224 (28.57%), Postives = 103/224 (45.98%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSD-MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 64/224 (28.57%), Postives = 103/224 (45.98%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSD-MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  +QD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 64/224 (28.57%), Postives = 103/224 (45.98%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSD-MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD +  I  P D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSIQDI--PFDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  +  + F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_CHICK (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 63/223 (28.25%), Postives = 100/223 (44.84%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+       ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 59/211 (27.96%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   +VSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 65/224 (29.02%), Postives = 104/224 (46.43%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTA-SRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+   D+S  ++T+ S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLTSCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     +VSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 73.559 bits (179), Expect = 1.242e-12
Identity = 63/211 (29.86%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D +V+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHLVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            +IV+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W       Y ++    H EWV  VR  PN     I S+S D+TV+VW ++  + +A L  H   V  ++ +P+ +
Sbjct:  122 VIVSASEDATIKVW-----DHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--ATGYCVKTFTGHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESA 289

HSP 2 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 64/220 (29.09%), Postives = 102/220 (46.36%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA------------------SWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            T++ HTD V  I+       ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++A G   + F GH + V  V  + D   I S+S D+T+++W     ECK  ++E   H   V C+ ++P +  PTI+ A                  S D+T+K+W++S      TL GH  +V  V V P G    S
Sbjct:  145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVS 355

HSP 3 Score: 81.2629 bits (199), Expect = 5.957e-15
Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W ++      T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 79.337 bits (194), Expect = 2.264e-14
Identity = 59/211 (27.96%), Postives = 100/211 (47.39%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V   P      IVS + D+T+++W+  N +   TL+ H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLV---GHDNWVRGVLVHPGGKY--IVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386

HSP 5 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++A G  +K T   H + V  +  P  +  +I ++S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V      + IVS + D+T+++W+   + C  T+    AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVATGYCVK-TFTGHREWVRMVR-PNQDGTLIASSSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL---SAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 54/157 (34.39%), Postives = 90/157 (57.32%), Query Frame = 1

Query:  238 RRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705
            R  L GHS  +  V  S +G++  S + D  + +W   +GK  +   GH+ ++  VA+S D+ ++VSAS D+T+KLW+   G+C  T++    H+++V C  F+P +    IVS S+D +VK+W +   K   TL+ H+  ++ V    +GSL  SG
Sbjct:   32 RLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLK---GHSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSG 183

HSP 2 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 71/220 (32.27%), Postives = 110/220 (50.00%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            + T  +  +  G  LK T++ H+D V         S++IV+ S DES+ +W    E KT G   + L+ HS  +  V    +G   +SGS+DG  R+WD A G+  R         +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T +  +VS S D  V +WNL   ++   L GHT  V + A  P  ++ AS
Sbjct:  102 DKTLKLWDVRSGKCLK-TLKGHSDFVFCCDFN-PPSNLIVSGSFDESVKIW----EVKT-GKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYT-GHKNEKYCIFASFSV-TGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTENIIAS 312

HSP 3 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 61/201 (30.35%), Postives = 101/201 (50.25%), Query Frame = 1

Query:   91 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH-TGYVNTVAVSPDG 687
            L+ T+  H+  ++++     N + + +++ D  II+W         G  ++ L GHS  + DV  SSD    +S S D  L+LWD+  GK  +   GH+  V    F+  +  IVS S D ++K+W    G+C  T+    AH++ +S V F  N     IVS S+D   ++W+ ++ +   TLA      V+ V  SP+G
Sbjct:   31 LRLTLAGHSAAISSVKFS-PNGEWLASSAADALIIIWGAYD-----GKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTL---SAHSDPISAVHFHCN--GSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNG 220

HSP 4 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 51/191 (26.70%), Postives = 90/191 (47.12%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHF-VQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGH--TKDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 609
            + +  I ++  G  LK T+ AH+D ++A+     N  +IV+ S D    +W     +   G   R L    +  V  V  S +G++ L+ + D  L+LWD + G+  + + GH   K  +  +FS+  R+ +VS S D  + +WN   + K  +Q    HT+ V      P        +   D+T+K+W+
Sbjct:  144 DESVKIWEVKTGKCLK-TLSAHSDPISAVHFHC-NGSLIVSGSYDGLCRIW-----DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNL--QTKEIVQRLQGHTDVVISAACHPTENIIASAALENDKTIKIWS 325

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSA+RD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 63/224 (28.12%), Postives = 103/224 (45.98%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSD-MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S + D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSA+ D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 63/211 (29.86%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+A+RD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSAARDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1

Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 690
            ++V+AS D +I VW     +   G   R L GH+  V+D+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 64/224 (28.57%), Postives = 103/224 (45.98%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSD-MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V        G L  SGGK
Sbjct:  145 TLKGHTDSVEDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR-------GVLFHSGGK 351

HSP 3 Score: 81.6481 bits (200), Expect = 4.561e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 1

Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1

Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  + N D IV+ASRD++I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 57/189 (30.16%), Postives = 102/189 (53.97%), Query Frame = 1

Query:  142 PIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705
            P + +  +++A R E        + +K     R  L GHS  +  V  S +G++  S + D  + +W   +G   +   GH+ ++  VA+S D+ ++VSAS D+T+K+W+   G+C  T++    H+++V C  F+P +    IVS S+D +VK+W +   K   TL+ H+  ++ V  + +GSL  SG
Sbjct:    7 PAERAQSLLSAPRREE-------EPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK---GHSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSG 183

HSP 2 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 72/220 (32.73%), Postives = 111/220 (50.45%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            + T  +  M  G  LK T++ H+D V         S++IV+ S DES+ +W    E KT G   + L+ HS  +  V  + +G   +SGS+DG  R+WD A G+  R         +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T +  +VS S D  V +WNL   ++   L GHT  V + A  P  ++ AS
Sbjct:  102 DKTLKVWDMRSGKCLK-TLKGHSDFVFCCDFN-PPSNLIVSGSFDESVKIW----EVKT-GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCLFASFSV-TGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312

HSP 3 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 56/186 (30.11%), Postives = 96/186 (51.61%), Query Frame = 1

Query:   94 KGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH 648
            K T+  H+  ++ +A   D+S  +V+AS D+++ VW +       G   + L GHS FV     +      +SGS+D  +++W++  GK  +    H+  + +V F+ +   IVS S D   ++W+   G+C  T+   D     VS V+FSPN     I++A+ D T+K+W+ S  +   T  GH
Sbjct:   74 KKTLYGHSLEISDVAWSSDSS-RLVSASDDKTLKVWDMRS-----GKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL--ADEGNPPVSFVKFSPN--GKYILTATLDNTLKLWDYSRGRCLKTYTGH 249

HSP 4 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 1

Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHF-VQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGH--TKDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC 621
            + +  I ++  G  LK T+ AH+D ++A+     N  +IV+ S D    +W     +   G   R L    +  V  V  S +G++ L+ + D  L+LWD + G+  + + GH   K  L  +FS+  R+ +VS S D  + +WN   + K  +Q    HT+ V      P        +   D+T+KVW+ S+C
Sbjct:  144 DESVKIWEVKTGKCLK-TLSAHSDPISAVNFNC-NGSLIVSGSYDGLCRIW-----DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL--QTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS-SDC 328

The following BLAST results are available for this feature:

BLAST of FC932532 vs. ExPASy Swiss-Prot

BLAST of FC932532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339


Match Name	E-value	Identity	Description
LIS1_MOUSE	3.606e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_HUMAN	3.606e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_PONAB	4.709e-20	35.03	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_CHICK	4.709e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_MACFA	6.150e-20	35.03	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1A_DANRE	6.150e-20	35.59	Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1...	[more]
WDR5B_RAT	8.033e-20	34.39	WD repeat-containing protein 5B OS=Rattus norvegic...	[more]
LIS1_PIG	8.033e-20	35.03	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_BOVIN	8.033e-20	35.03	Platelet-activating factor acetylhydrolase IB subu...	[more]
WDR5B_MOUSE	1.370e-19	30.16	WD repeat-containing protein 5B OS=Mus musculus GN...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34209F03EF PostHarveN Citrus clementina cDNA clone C34209F03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC932532 ID=FC932532; Name=FC932532; organism=Citrus clementina; type=EST; length=723bp
GCTAGCTCGCCTCTCAAACCCTAACAGCAGGGGGGAAAAAAAAATACCGA
AAGTACATTTGCTATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAGGAA
CCATGCGCGCCCACACCGACATGGTAACGGCGATCGCCACCCCAATCGAC
AACTCTGACATGATCGTGACGGCCTCGCGTGACGAGTCCATCATTGTCTG
GCACCTCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGA
CCGGCCACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAG
TTCGCTCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGC
CGAGGGCAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCT
CCGTCGCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGAC
CGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCA
AGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCA
ACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAA
GTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACAC
TGGATACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCA
GTGGAGGGAAAAGATGTGTGATC