FC932532

Overview
NameFC932532
Unique NameFC932532
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2783 contig Ccv1_Contig2783:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 71/228 (31.14%), Postives = 111/228 (48.68%), Query Frame = 1
Query:   67 GKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKD-VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL---SNCK---------LRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            GK+   L  + + R     V ++A   D    + T   D+ I +W +  +++ Y    R LTGH   +  +  S DG+  +SGS D  + LWD+  G+  ++ + HT D V +V FS D + I + S D+ I++W + G     +++   H E V  V FSP+     +VS S D T+K+W L   SN            + T  GH  ++ +V VSPDG    SG K
Sbjct:  318 GKLITLLQEESSKREGDLYVRSVAFSPDGK-YLATGVEDQQIRIWDIA-QKRVY----RLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGT---LVEQLHGHEESVYSVAFSPD--GKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSK 532          

HSP 2 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 66/195 (33.85%), Postives = 97/195 (49.74%), Query Frame = 1
Query:  163 IVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHF-VQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-------------GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705
            +V+ S D ++ +W +   E+       +L  H+   V  V+ S DGQF  +GS D  +R+W  + G    +  GH + V SVAFS D + +VS S D TIKLW                G CK T      H +++  V  SP+     I+S S DRT++ W+  +   + TL GH   V +VAVSP+G   A+G
Sbjct:  391 LVSGSGDRTVCLWDVEAGEQ-------KLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFT---GHKDFILSVTVSPDG--KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATG 572          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 67/218 (30.73%), Postives = 98/218 (44.95%), Query Frame = 1
Query:   91 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTL-------QP------TIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L+ T++ HTD V  IA       + V+ S D SI +W   +   TY   +  L GH H V  V     G F LS S D  ++ WD++ G     F GH   V  +  S D     SAS D+T+ +W+      K  +++   H   V CV ++P+T        QP       + S S DR++K WN++   +  TL  H  +V  +A  P G    S
Sbjct:  140 LERTLKGHTDAVNDIAIDAAGKQL-VSCSSDLSIKLWDFGQ---TYDCLKS-LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRD---HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLIS 349          

HSP 2 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 1
Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD 684
            ++ + S D +I VW     +   G   R L GH+  V D+ + + G+  +S S D  ++LWD  +     +   GH   V SV F      ++SASRD TIK W+ + G C YT +    H +WV  +R S +       SAS D+TV VW+ +    +  L  H   V  V  +PD
Sbjct:  120 IMASCSEDATIKVW-----DYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFR---GHNDWVRMIRISND--GTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPD 286          

HSP 3 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 1
Query:  241 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            ++LTGH   +  V+         S S D  +++WD   G+  R   GHT  V  +A     +Q+VS S D +IKLW+  G+    ++    H   VS V F P      ++SAS D T+K W++S      T  GH  +V  + +S DG+L AS
Sbjct:  100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD-FGQTYDCLKSLKGHEHTVSSVTFLPT--GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFAS 250          

HSP 4 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 1
Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ---------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVA 672
            +++ H   V+++ T +   D +++ASRD +I  W ++     Y        GH+ +V+ + +S+DG    S S D  + +W  A   +      H   V  V ++ D                  + S SRDR+IK WN   G+  +T+    AH  WV  + F P      ++S + D+T++VW LS  +    +  H  +V+TVA
Sbjct:  186 SLKGHEHTVSSV-TFLPTGDFVLSASRDHTIKQWDISTGYCVY-----TFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL---AHENWVRGLAFHPKGKY--LISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVA 381          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 64/203 (31.53%), Postives = 96/203 (47.29%), Query Frame = 1
Query:  124 VTAIATPIDN------SDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            +T   TP+++       ++IV  S+  S+ VW L   +       R L GH   V  +     G F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GG+
Sbjct:   59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGR 251          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG----SLCASG 705
            LTGH   V  V +SS      S S DG + LW   +G+  R F GHT  +  V FS + +   +A +D+T+K+W+  G    T++    H + V  V FSP+     + S S DRTV++W+  + K  A L GHT  V+    SPDG    S+C  G
Sbjct:  556 LTGHRDGVTSVAISSHKNLIASASRDGTVHLWT-PQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLK---GHQDSVYSVSFSPD--GEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDG 706          

HSP 2 Score: 85.8853 bits (211), Expect = 2.419e-16
Identity = 65/254 (25.59%), Postives = 110/254 (43.31%), Query Frame = 1
Query:   46 TESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS----------------------------------------NCKLRATLAGHTGYVNTVAVSPDG 687
            T    ++ ++   +  K  +  H D VT++A    + ++I +ASRD ++ +W         G   R  TGH+  +  V  S +G+   +   D  +++WDL +G   +   GH   V SV+FS D   + S SRDRT++LW+        +  G  HT+ V   +FSP+    T+VS   D  +++W+L                                           +++ATL+GH  +V  V  +PDG
Sbjct:  537 TSPLVSLQQILSQIAEKNVLTGHRDGVTSVAIS-SHKNLIASASRDGTVHLW------TPQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGG--HTKSVDDAQFSPD--GQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHDEFVTRVVFTPDG 778          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 65/203 (32.02%), Postives = 109/203 (53.69%), Query Frame = 1
Query:   91 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDG 687
            LK T+  HT  V+A+     N + + ++S D+ I +W  +  K EKT       ++GH   + DV  SSD +  +SGS D  L++W+L+ GKS +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G
Sbjct:   64 LKFTLAGHTKAVSAVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 253          

HSP 2 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 52/153 (33.99%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+R +VS S D+T+K+W  + G+   T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S
Sbjct:   68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 215          

HSP 3 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 68/220 (30.91%), Postives = 110/220 (50.00%), Query Frame = 1
Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            + T  + +++ G  LK T++ H++ V         S++IV+ S DES+ +W +       G   + L  HS  V  V  + DG   +S S+DG  R+WD A G+  +  +      +S V FS + + I++A+ D T+KLW+ + G+C  T   G  + ++     FS  T    IVS S D  V +WNL + ++   L GHT  V   A  P  ++ AS
Sbjct:  135 DKTLKVWELSTGKSLK-TLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVRT-----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIAS 345          

HSP 4 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGH--TKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + +  I  +  G  LK T+ AH+D V+A+    D S +IV++S D    +W     +      +  +   +  V  V  S +G++ L+ + D  L+LWD ++GK  + + GH   K  +   FS+   + IVS S D  + +WN   + K  +Q+   HT+ V C    P        +   D+T+K+W
Sbjct:  177 DESVRIWDVRTGKCLK-TLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL--QSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            L GH   V  V +S + ++  + S DG +++W     +      GH + +  V ++  ++ + SAS D+TI++W+    C     +G  HT +VS + F+P  L   +VS SWD TV++WNL +      L  H+  + +V++S DG+LCA+
Sbjct:   50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKG--HTNYVSSIDFNP--LGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCAT 197          

HSP 2 Score: 71.2478 bits (173), Expect = 6.165e-12
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 1
Query:  154 SDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQE 504
            S  + +AS D++I +W   K       + R L GH+++V  +  +  G   +SGSWD  +R+W+L +G   R    H++ ++SV+ S D     +AS D   ++W+ L G+C  T+ E
Sbjct:  108 SKYLASASDDKTIRIWDFEKR-----CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  265 FVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGEC--KYTIQEG-----------------------------------DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------------LRATLAGHTGYVNTVAVSPDGSLCASGGK 711
            +V+ +  S DG++ ++G+ D +++LWDL+  K    F GH +D+ S+ FS + R IVS S DRT +LW+   G+C  K  I+ G                                   + H E V  + FSP++    ++S S D+T+KVW L   +             +AT  GHT +V +VAVSPD     SG K
Sbjct:  362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSK 558          

HSP 2 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  103 MRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEE-------KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN 471
            +  H + V +IA   D+S ++++ S D++I VW L           K  G+ +   TGH+ FV  V +S D ++ LSGS D  ++ WDL  G+S     GH   V+SV FS D RQ  S S D   ++W+
Sbjct:  480 LEGHKESVYSIAFSPDSS-ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 56/220 (25.45%), Postives = 99/220 (45.00%), Query Frame = 1
Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            +++ HTD V  +A       ++ + S D SI +W   +  +      + + GH H V  V     G + LS S D  +++W++A G   + + GH + V  V   I+     + S D+TI++W T   +CK  +++   H   V C+ ++P                      P + S S D+T+++W++S      TL+GH  +V  +A  P G    S
Sbjct:  145 SLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECI----KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS 356          

HSP 2 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  160 MIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEG-KSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCA 699
            ++V+AS D +I +W         G   R L GH+  VQDV   + G+   S S D  ++LWD  +  +  +   GH  +V SVAF      ++SASRDRTIK+W       Y ++    H EWV  VR   +       + S D+T++VW  ++   +  L  H   V  +A +P+ +  A
Sbjct:  122 LMVSASEDATIRIWDFET-----GEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV--ATGYCVKTYTGHREWVRMVRV--HIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASA 293          

HSP 3 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            LTGH   +  V+        +S S D  +R+WD   G+  R   GHT  V  VAF    + + S S D +IKLW+   +    I+    H   VS V F P      ++SAS DRT+K+W ++      T  GH  +V  V V  +GS+ A+
Sbjct:  104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFAT 252          

HSP 4 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 60/212 (28.30%), Postives = 101/212 (47.64%), Query Frame = 1
Query:  100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSAR---RFVGHTKD-----------VLSVAFSIDNRQ-------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669
            TM  H   V+++A  +   D +++ASRD +I +W     E   G   +  TGH  +V+ V +  +G    + S D  +R+W L   K  +   R   HT +            ++ A   DN++       + S SRD+TI++W+ ++G C  T+     H  WV  + F P      +VSAS D+T++VW+L N +   TL  H  +  ++
Sbjct:  188 TMHGHDHNVSSVAF-VPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS---GHDNWVRGLAFHPGGKY--LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387          

HSP 5 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 56/207 (27.05%), Postives = 94/207 (45.41%), Query Frame = 1
Query:   49 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 606
            + T  + ++A G  +K T   H + V  +   I+ S +  T S D++I VW    ++      +  L  H H V+ +  + +                    G F  SGS D  +R+WD++ G       GH   V  +AF    + +VSAS D+TI++W+   + C  T+    AH  + + + F  +   P ++S S D+TVKVW
Sbjct:  214 DRTIKMWEVATGYCVK-TYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKD-----CKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLY---AHQHFCTSIDF--HKAHPYVISGSVDQTVKVW 408          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 62/210 (29.52%), Postives = 96/210 (45.71%), Query Frame = 1
Query:   76 AEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705
            A  ++    +R H D V       D  D++VT S D ++ VW + K E  Y      L GH+  V    +S  G++ +SGS D  +++W   +G       GHT  V  +A +     +V+ SRD T+++W+           G  H   V CV+F   T    +VS  +D TVK+WN    +   TL GH   V ++    + S+  SG
Sbjct:  242 ANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMY-----TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHG--HHAAVRCVQFDGTT----VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSG 436          

HSP 2 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG 708
            L GH   V   +   D    ++GS D  L++W + +G+     VGHT  V +   S   R IVS S DRT+K+W+T+ G   +T+Q    HT  V C+  + + L    V+ S D T++VW++ + +  ATL GH   V  V    DG+   SGG
Sbjct:  251 LRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ---GHTSTVRCMAMAGSIL----VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGG 395          

HSP 3 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 59/223 (26.46%), Postives = 97/223 (43.50%), Query Frame = 1
Query:   43 NTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYV--------NTVAVSPD 684
            +T+ T  +    +G +L  T++ HT  V  +A       ++VT SRD ++ VW +          R   T H H      +  DG   +SG +D  +++W+   G+  R   GH   V S+ F  +   + S S D +I++W+ T  E +  +     HT   S ++   N L    VS + D  V+VW++        L+GH   +        N VA S D
Sbjct:  315 STDRTVKVWSTVDGSLLH-TLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVES-------GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522          
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 70/222 (31.53%), Postives = 108/222 (48.65%), Query Frame = 1
Query:   43 NTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702
            + + T A+   A G  +  T+  H+  V+ +A    N   + TA+ D S+ +W     +   G   R LTGH+++V       + G    SGS+D  LRLWD+  G+  R    H+  V S AFS D   +V++S D  I+LW+T  G C  T+ + D+    VS   F+PN     ++  + D   K+W+ +  + R T AG  G+VNT      G L  S
Sbjct:   59 SADRTVALWDAATGARVN-TLAGHSCGVSDVAWN-PNGRYLATAADDHSLKLW-----DAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPP--VSFAAFTPNA--KYVLCNTLDGRAKLWDYAAGRTRRTYAG--GHVNTQFCISSGFLGGS 267          

HSP 2 Score: 82.0333 bits (201), Expect = 3.492e-15
Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 693
            L+GH+  V  V  S DG    SGS D  + LWD A G       GH+  V  VA++ + R + +A+ D ++KLW+   G C  T+     HT +V C  F        + S S+D T+++W++ + +    +  H+  V + A S DGS+
Sbjct:   36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTL---TGHTNYVFCCNFD-GAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSM 181          
The following BLAST results are available for this feature:
BLAST of FC932532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
TUP12_SCHPO2.584e-1831.14Transcriptional repressor tup12 OS=Schizosaccharom... [more]
LIS1_CAEEL2.584e-1830.73Lissencephaly-1 homolog OS=Caenorhabditis elegans ... [more]
KTNB1_XENTR4.408e-1831.53Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
Y143_SYNY35.757e-1836.31Uncharacterized WD repeat-containing protein slr01... [more]
WDS_DROME5.757e-1832.02Protein will die slowly OS=Drosophila melanogaster... [more]
SWD3_SCHPO9.819e-1831.58Set1 complex component swd3 OS=Schizosaccharomyces... [more]
TUP11_SCHPO1.282e-1731.16Transcriptional repressor tup11 OS=Schizosaccharom... [more]
LIS1_DROME2.857e-1725.45Lissencephaly-1 homolog OS=Drosophila melanogaster... [more]
SEL10_CAEEL3.731e-1729.52F-box/WD repeat-containing protein sel-10 OS=Caeno... [more]
MUT11_CHLRE3.731e-1731.53Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut1... [more]

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Properties
Property NameValue
Genbank descriptionC34209F03EF PostHarveN Citrus clementina cDNA clone C34209F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932532 ID=FC932532; Name=FC932532; organism=Citrus clementina; type=EST; length=723bp
GCTAGCTCGCCTCTCAAACCCTAACAGCAGGGGGGAAAAAAAAATACCGA
AAGTACATTTGCTATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAGGAA
CCATGCGCGCCCACACCGACATGGTAACGGCGATCGCCACCCCAATCGAC
AACTCTGACATGATCGTGACGGCCTCGCGTGACGAGTCCATCATTGTCTG
GCACCTCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGA
CCGGCCACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAG
TTCGCTCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGC
CGAGGGCAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCT
CCGTCGCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGAC
CGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCA
AGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCA
ACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAA
GTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACAC
TGGATACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCA
GTGGAGGGAAAAGATGTGTGATC
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