FC932532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 157 DMIVTASRDESIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG 708 +++++ S D +I +W L TY GH + V DV + G + +S S+D RLW ++ R FVGH DV V F ++ + + S DRT++LW+ + + G H VS + FS + S S D + +W+LSN L TL HT V T+ S DG++ A+ G Sbjct: 463 NLLLSCSEDSTIRLWSLLTWSCVVTY-------RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG--HKGSVSSLAFS--ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637 HSP 2 Score: 75.8702 bits (185), Expect = 2.503e-13 Identity = 60/212 (28.30%), Postives = 88/212 (41.51%), Query Frame = 1 Query: 148 DNSDMIVTASRDESIIVWHLT-----------------KE---------EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 D+S M+ D S+ +W LT KE + G R L GH+ V + + LS S D +RLW L + GH V V F+ VS S D+T +LW T + ++ H V CV+F PN+ + + S DRTV++W+ + + GH G V+++A S G ASG Sbjct: 387 DDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT--DSNQALRVFVGHLSDVDCVQFHPNS--NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASG 594
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17 Identity = 56/185 (30.27%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 151 NSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 ++D++VT S D ++ VW + G + L GHS V +S G++ +SGS D +++W +G GHT V +A + N +V+ SRD T+++W+ E ++ H V CV+F N +VS +D TVK+W+ + K TL GH+ V ++ + S+ SG Sbjct: 267 HNDLLVTGSDDNTLKVWSIDD-----GEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMA--NTTLVTGSRDCTLRVWDI--ETGLHVRTLQGHQAAVRCVQFDGN----IVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSG 438 HSP 2 Score: 78.9518 bits (193), Expect = 2.956e-14 Identity = 58/210 (27.62%), Postives = 101/210 (48.10%), Query Frame = 1 Query: 43 NTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 669 +T+ T + + +G +L T++ HT V +A + +VT SRD ++ VW + G+ R L GH V+ V DG +SG +D +++WD GK R +GH+ V S+ + + + S S D +I++W+ + E + I HT S ++ N L VS + D V+VW++ L+GH + ++ Sbjct: 317 STDRTVKVWRAEDGFLLH-TLQGHTSTVRCMAMA---NTTLVTGSRDCTLRVWDIET-----GLHVRTLQGHQAAVRCVQF--DGNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIYEGTCIHILSGHRSAITSL 511 HSP 3 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 247 LTGHS-HFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG 708 L GH H + + + +D ++GS D L++W + +G+ GH+ V + S R IVS S DRT+K+W E + + HT V C+ + NT T+V+ S D T++VW++ TL GH V V DG++ SGG Sbjct: 253 LRGHEEHVITCMQIHND--LLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWR--AEDGFLLHTLQGHTSTVRCMAMA-NT---TLVTGSRDCTLRVWDIETGLHVRTLQGHQAAVRCVQF--DGNIVVSGG 397
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17 Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 169 TASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702 T D S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 169 TASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702 T D S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 169 TASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702 T D S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 340 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 509
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 169 TASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702 T D S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 151 NSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVV-LSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCAS 702 N+D+ +R +I K E + R+ + V+ L + + +GS+D + +WDL GK RR GH+ V ++ F D+R++++ S D+TI++WN + GEC T + H++ V S ++ Q IVS S D+TVKVW++ + + TL GHT +VN V + P C S Sbjct: 263 NADIQTQTTRPWKVIYRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYR---GHSDSV----LSVDSYQKVIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFS 438
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 66/205 (32.20%), Postives = 102/205 (49.76%), Query Frame = 1 Query: 100 TMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVG-HTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCV--RFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 T++ HT+ V S ++V+ S DES+ +W + G+ + L HS V V + DG SGS+DG +R+WD A G+ + V V V FS + + I+S++ D T+KLW+ G+ K T+++ H C+ FS T I+S S D + VWNL ++ +L GHT V P ++ ASG Sbjct: 158 TLKGHTNYVFCCNFN-PQSSLVVSGSFDESVRIWDVRT-----GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD-FGKGK-TLKQYQGHENNKYCIFANFSV-TGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASG 353 HSP 2 Score: 82.4185 bits (202), Expect = 2.674e-15 Identity = 47/153 (30.72%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 247 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 + GH+ + V S G+F + S D +++W++++ R GH V A+S D++ IV+AS D+T+K++ +G HT +V C F+P + +VS S+D +V++W++ TL H+ V+ V+ + DGSL SG Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKG--HTNYVFCCNFNPQS--SLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSG 223 HSP 3 Score: 82.4185 bits (202), Expect = 2.674e-15 Identity = 62/206 (30.10%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 34 GKKNTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH 648 G + + T I M++ L + T+ H V A D S IVTAS D+++ ++ E T +A+ L GH+++V + +SGS+D +R+WD+ G + H+ V +V+F+ D I S S D +++W+T G+C T+ D V+ V+FSPN I+S++ D T+K+W+ K GH Sbjct: 95 GTSSADKTVKIWNMSD-LSCERTLTGHKLGVNDFAWSAD-SKSIVTASDDKTLKIY----EVPTVKMAKT-LKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLV--DDENPPVAFVKFSPN--GKYILSSNLDNTLKLWDFGKGKTLKQYQGH 289
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PLRG1_HUMAN (Pleiotropic regulator 1 OS=Homo sapiens GN=PLRG1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 60/198 (30.30%), Postives = 89/198 (44.95%), Query Frame = 1 Query: 112 HTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 H V IA N VT S D +I +W L G + LTGH V+ V++S+ + S D +++ WDL K R + GH V + +V+ SRD T ++W+ K ++ HT V+ VR +P I++ S D T+++W+L K R TL H V V + P ASG Sbjct: 203 HLGWVRCIAVEPGNQ-WFVTGSADRTIKIWDLAS-----GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV--RTKASVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASG 390
BLAST of FC932532 vs. ExPASy Swiss-Prot
Match: PLRG1_BOVIN (Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 60/198 (30.30%), Postives = 89/198 (44.95%), Query Frame = 1 Query: 112 HTDMVTAIATPIDNSDMIVTASRDESIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 705 H V IA N VT S D +I +W L G + LTGH V+ V++S+ + S D +++ WDL K R + GH V + +V+ SRD T ++W+ K ++ HT V+ VR +P I++ S D T+++W+L K R TL H V V + P ASG Sbjct: 202 HLGWVRCIAVEPGNQ-WFVTGSADRTIKIWDLAS-----GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV--RTKASVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASG 389 The following BLAST results are available for this feature:
BLAST of FC932532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 339
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932532 ID=FC932532; Name=FC932532; organism=Citrus clementina; type=EST; length=723bpback to top |