FC932539

Overview
NameFC932539
Unique NameFC932539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPZ (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPM (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M28 GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPG (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPF (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GVRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPD (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPC (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPB (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP8 (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M18 GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP6 (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M6 GN=rplB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
[Close]
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP3 (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M3 GN=rplB PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 
Query:  128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685
            +R +DF         VVK I +D  R A +A V +    K  +I     A +G+  GQ I +G +A + VGN LPLA++P GTV+ N+E K G  G L R +G    V+G   ++GK   V+L SG  ++I  T R  +G V    ++   + KAGR++ K        P  RG  MNP DHPHGGG
Sbjct:   62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_STRPZ2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPM2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPG2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPF2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPD2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPC2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPB2.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRP82.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRP62.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRP32.125e-2237.9750S ribosomal protein L2 OS=Streptococcus pyogenes... [more]

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Properties
Property NameValue
Genbank descriptionC34209F10EF PostHarveN Citrus clementina cDNA clone C34209F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bp
GAACTCGTCAACGACAAGCCTATATCACTTCGAGACAGTCGCCATGGGTC
GTGTCATCCGCAACCAGAGGAAGGGTCGTGGCTCCATTTTCACGGCCAAC
ACCCGCCTGAACAAGGCCCCTGCCCAATTCCGGACCCTCGACTTCGCTGA
GGCTCACGGTTACACCCGTGGTGTCGTCAAGGAGATCATCCACGATGCCG
GCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGCCACCCCTACAAGTTC
AAGATGATCACCGAGACTTTCATCGCCAACGAGGGCATGTACACCGGCCA
GTTCATCTACGCCGGTAAGAACGCTGCCCTGACCGTCGGCAACATTCTTC
CTCTCGCCTCCATGCCCGAGGGTACCGTCATCACCAACGTCGAGGAGAAG
GCTGGTGACCGTGGTGCGCTTGGCCGTACCTCCGGTAACTACGTTACTGT
TATTGGCCACAACCCCGAGGATGGCAAGACCCGTGTCAAGCTCCCCTCCG
GTGCCAAGAAGGTCATCAAGAACACCGCTCGCGGTATGGTTGGTATCGTT
GCCGGTGGTGGCCGTACCGACAAGCCTTTGCTCAAGGCTGGTCGTGCCAA
GCACAAGTTCGCCGTCAAGCGCAACTCTTGGCCCAAGACTCGTGGTGTTG
CCATGAACCCCGTCGATCACCCTCACGGTGGTGGNTACCACCAGCACAT
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