FC932539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRPI (50S ribosomal protein L2 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT+I N+E K G G L R +G V+G +GK V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDNVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLG---SEGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP7 (50S ribosomal protein L2 OS=Streptococcus pneumoniae (strain 70585) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT+I N+E K G G L R +G V+G +GK V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDNVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLG---SEGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP4 (50S ribosomal protein L2 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT+I N+E K G G L R +G V+G +GK V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDNVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLG---SEGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRP2 (50S ribosomal protein L2 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 73/187 (39.04%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT+I N+E K G G L R +G V+G +GK V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDNVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLG---SEGKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_LACSS (50S ribosomal protein L2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 69/187 (36.90%), Postives = 100/187 (53.48%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF + VK I +D R + +A +Q+ K +I A +G+ G + +G NA + VGN LPLA++P+GT+I N+E K G G L R++G ++G ++GK V+L SG ++I T R VG V G + KAGR K ++ P RG MNP DHPHGGG Sbjct: 62 YRVIDFKRIKDDIKATVKSIEYDPNRTSNIALIQYPDGIKAYII-----APKGLEVGMIVESGVNADIKVGNALPLANIPDGTLIHNIELKPGKGGQLVRSAGTSAQLLG---KEGKYAIVRLTSGETRMILLTCRATVGTVGNGQHELIKIGKAGR-KRWMGIR----PTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_PINTH (50S ribosomal protein L2, chloroplastic OS=Pinus thunbergii GN=rpl2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 71/206 (34.47%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R GRG I TA R +R +DF + G + I +D R A + KV +++ K ++ G+ G I +G A +++GN LPL +MP GT I N+E G G L R +G +I ED ++LPSG ++I +G V ++ KAG ++ KR+ + RGVAMNPVDHPHGGG Sbjct: 44 RNGRG-IITARHRGGGHKRLYRQIDFRRNKEHISGEIVTIEYDPNRSAYICKVHYKNGDKMYILHP-----RGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIA--KEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGGG 236
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_PICAB (50S ribosomal protein L2, chloroplastic OS=Picea abies GN=rpl2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 71/206 (34.47%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R GRG I TA R +R +DF + G + I +D R A + KV +++ K ++ G+ G I +G A +++GN LPL +MP GT I N+E G G L R +G +I ED ++LPSG ++I +G V ++ KAG ++ KR+ + RGVAMNPVDHPHGGG Sbjct: 43 RNGRG-IITARHRGGGHKRLYRQIDFRRDKEHISGKIVTIEYDPNRSAYICKVHYKNGDKMYILHP-----RGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIA--KEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_MYCH7 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 72/207 (34.78%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R +G I T + + ++R +DF G+VK I +D R A +A + + K +A + + GQ I +G + + VGN LPLA +PEGT + N+E K G L R++G + + G + EDGK +KL SG + I T R +G+V + + KAGR +HK P RG MNP DHPHGGG Sbjct: 44 RNSQGKI-TVRHQGGRHKRKYRLIDFKRNKDDIPGIVKTIEYDPNRSANIALISYIDGEK-----RYILAPKNLKVGQKISSGPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRD-EDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGG 238
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_MYCH2 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 232) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 72/207 (34.78%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R +G I T + + ++R +DF G+VK I +D R A +A + + K +A + + GQ I +G + + VGN LPLA +PEGT + N+E K G L R++G + + G + EDGK +KL SG + I T R +G+V + + KAGR +HK P RG MNP DHPHGGG Sbjct: 44 RNSQGKI-TVRHQGGRHKRKYRLIDFKRNKDDIPGIVKTIEYDPNRSANIALISYIDGEK-----RYILAPKNLKVGQKISSGPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRD-EDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGG 238
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRTD (50S ribosomal protein L2 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 73/191 (38.22%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSW----PKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G +A + VGN LPLA++P GTVI N+E K G L R +G V+G ++GK V+L SG ++I T R +G V G + L+ G+A RN W P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVIHNIELKPGKGAELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTV---GNEQQSLINLGKA------GRNRWKGVRPTVRGSVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bpback to top |