FC932539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRT2 (50S ribosomal protein L2 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 73/191 (38.22%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSW----PKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G +A + VGN LPLA++P GTVI N+E K G L R +G V+G ++GK V+L SG ++I T R +G V G + L+ G+A RN W P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVIHNIELKPGKGAELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTV---GNEQQSLINLGKA------GRNRWKGVRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRT1 (50S ribosomal protein L2 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 73/191 (38.22%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSW----PKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G +A + VGN LPLA++P GTVI N+E K G L R +G V+G ++GK V+L SG ++I T R +G V G + L+ G+A RN W P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLANIPVGTVIHNIELKPGKGAELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGTV---GNEQQSLINLGKA------GRNRWKGVRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRSY (50S ribosomal protein L2 OS=Streptococcus suis (strain 05ZYH33) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 72/187 (38.50%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF +VK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GTV+ N+E K G G L R +G V+G ++GK V+L SG ++I T R VG V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDGVEAIVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRS2 (50S ribosomal protein L2 OS=Streptococcus suis (strain 98HAH33) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 72/187 (38.50%), Postives = 96/187 (51.34%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF +VK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GTV+ N+E K G G L R +G V+G ++GK V+L SG ++I T R VG V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLVDFKRNKDGVEAIVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRE4 (50S ribosomal protein L2 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 71/187 (37.97%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G +A + VGN LPL ++P GTV+ N+E K G G L R +G V+G ++GK V+L SG ++I T R VG V ++ + KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKVGNALPLVNIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_NITWN (50S ribosomal protein L2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 65/218 (29.82%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 32 ETVAMGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +T+ G+ + R G I T R +R +DF VV+ + +D R A +A ++++ + ++ A + M G + AG + GN++PL +MP GT++ NVE K G G L R++G Y ++G + + ++L SG ++++ RG +G V+ + + KAGR + P RGV MNP+DHPHGGG Sbjct: 31 KTLTEGKRGKGGRNNTGRI-TVRFRGGGHKQAYRNVDFKRGKTDVPAVVERLEYDPNRTAFIALIKYQDGEQAYIL-----APQRMAVGDTVVAGNYVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGRDQD--YVILRLNSGEQRLVHGRCRGAIGAVSNPDHMNTSVGKAGRTRW-----MGRRPHNRGVVMNPIDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_PINKO (50S ribosomal protein L2, chloroplastic OS=Pinus koraiensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 71 KGRGS--IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 KGR + I TA R +R +DF + G + I +D R A + KV +++ K ++ G+ G I +G A +++GN+LPL +MP GT I N+E G G L R +G +I ED ++LPSG ++I +G V ++ KAG ++ KR+ + RGVAMNPVDHPHGGG Sbjct: 42 KGRNARGIITARHRGGGHKRLYRQIDFRRDKEHISGEIVTIEYDPNRSAYICKVHYKNGDKMYILHP-----RGVMIGDTILSGPKAPISIGNVLPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIA--KEDRSATLRLPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGGG 236
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_WOLWR (50S ribosomal protein L2 OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=rplB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 71/219 (32.42%), Postives = 115/219 (52.51%), Query Frame = 2 Query: 32 ETVAMGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +++ G+ R G I T + R ++R +DF +G+V++I +D R LA + YK I +A +GM G + AG +A + GN L L +P G+ + NVE K G+ A+ R +G Y ++G DG+ ++L SG ++I ++ + +G+V+ ++ L KAGR++ ++ P RGVAMNPVDHPHGGG Sbjct: 31 KSLTSGKKSSGGRNNHGRITTRH-RGGGHKKKYRVIDFKRNRS-GQGIVEKIEYDPNRSGFLALIS----YKEDDIKSYILAPQGMKPGDVVTAGNDADILPGNCLLLKHIPVGSFVHNVELKPGNGAAIARAAGCYAQIVG---RDGQYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAGRSRW-LGIR----PTVRGVAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_DINSH (50S ribosomal protein L2 OS=Dinoroseobacter shibae (strain DFL 12) GN=rplB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 66/206 (32.04%), Postives = 100/206 (48.54%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R G I T R A +R +DF GV+ I +D R A +A V + + ++ A + G + A + A + GN +P + MP GT++ N+E K G G + R +G Y +G + G +++L SG ++++ VG V+ +++ L KAGR +HK P RGV MNPVDHPHGGG Sbjct: 43 RNNTGRI-TMRRRGGGAKRLYRIVDFKRRKFDVEGVITRIEYDPNRTAFIALVTYTDGEQAYIL-----APQRTAVGDKVVASQKADIKPGNAMPFSGMPIGTIVHNIELKPGKGGQIARAAGTYAQFVGR--DGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNLGKAGRNRHK-----GIRPSVRGVVMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_WOLPM (50S ribosomal protein L2 OS=Wolbachia pipientis wMel GN=rplB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 70/219 (31.96%), Postives = 115/219 (52.51%), Query Frame = 2 Query: 32 ETVAMGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +++ G+ R G I T + R ++R +DF +G+V++I +D R LA + YK I +A +GM G + AG +A + GN L L +P G+ + NVE K G+ A+ R +G Y ++G DG+ ++L SG ++I ++ + +G+V+ ++ L KAGR++ ++ P RG+AMNPVDHPHGGG Sbjct: 31 KSLTSGKKSSGGRNNHGRITTRH-RGGGHKKKYRVIDFKRNRS-GQGIVEKIEYDPNRSGFLALIS----YKEDDIKSYILAPQGMKPGDVVTAGNDADILPGNCLLLKHIPVGSFVHNVELKPGNGAAIARAAGCYAQIVG---RDGQYVLLRLRSGQIRLILSSCKATIGVVSNPDHKNRKLGKAGRSRW-LGIR----PTVRGIAMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bpback to top |