FC932539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_BUCAT (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF V+ +D R + +A + ++ + + +A +G+ G I +G A + GN LPL ++P GT + NVE K G G + R++G+YV ++ + E R++ SG + ++ R +G V K L KAG A ++ P RG AMNPVDHPHGGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDGER-----KYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAFDEEYATLRLR--SGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_BUCAI (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF V+ +D R + +A + ++ + + +A +G+ G I +G A + GN LPL ++P GT + NVE K G G + R++G+YV ++ + E R++ SG + ++ R +G V K L KAG A ++ P RG AMNPVDHPHGGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDGER-----KYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAFDEEYATLRLR--SGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_BUCA5 (50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF V+ +D R + +A + ++ + + +A +G+ G I +G A + GN LPL ++P GT + NVE K G G + R++G+YV ++ + E R++ SG + ++ R +G V K L KAG A ++ P RG AMNPVDHPHGGG Sbjct: 62 YRIVDFKRNKDDIGATVERFEYDPNRSSNIALILYKDGER-----KYILAPKGIKIGDTIISGLRAPIKTGNTLPLKNIPVGTFVHNVELKPGKGGQIARSAGSYVQLVAFDEEYATLRLR--SGEMRKTQSNCRATIGEVGNSEHMLKVLGKAG-ASRWIGIR----PTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_ACTPJ (50S ribosomal protein L2 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VV+ + +D R A +A V ++ + +A +G+ G I AG +A + GN LP+ ++P GT + NVE K G G + R++G YV +I E ++L SG + + +G V + L KAG + R P RG AMNPVDHPHGGG Sbjct: 62 YRLVDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDGER-----RYILAPKGLSVGDTIQAGVSAPIKAGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGAYVQIIAR--EGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRW-----RGVRPTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_ACTP7 (50S ribosomal protein L2 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VV+ + +D R A +A V ++ + +A +G+ G I AG +A + GN LP+ ++P GT + NVE K G G + R++G YV +I E ++L SG + + +G V + L KAG + R P RG AMNPVDHPHGGG Sbjct: 62 YRLVDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDGER-----RYILAPKGLSVGDTIQAGVSAPIKAGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGAYVQIIAR--EGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRW-----RGVRPTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_ACTP2 (50S ribosomal protein L2 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VV+ + +D R A +A V ++ + +A +G+ G I AG +A + GN LP+ ++P GT + NVE K G G + R++G YV +I E ++L SG + + +G V + L KAG + R P RG AMNPVDHPHGGG Sbjct: 62 YRLVDFKRNKLDIPAVVERLEYDPNRSANIALVLYKDGER-----RYILAPKGLSVGDTIQAGVSAPIKAGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGAYVQIIAR--EGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRW-----RGVRPTVRGTAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_ACIAD (50S ribosomal protein L2 OS=Acinetobacter sp. (strain ADP1) GN=rplB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VV+ I +D R A +A +++ + IA +G+ G + +G +A + GN LPL +MP G+ + NVE K G L R++G V ++G + V+L SG + I R ++G V+ + L KAG ++ R P RG+AMNPVDHPHGGG Sbjct: 62 YRLVDFKRNKDGIPAVVERIEYDPNRTAHIALLKYADGER-----RYIIAPKGLRAGDKVQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGTSVQLLGR--DGSYAIVRLRSGEMRKIHVECRAVIGEVSNQENNLRSLGKAGASRW-----RGVRPTVRGMAMNPVDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_SPIOL (50S ribosomal protein L2, chloroplastic OS=Spinacia oleracea GN=rpl2-A PE=1 SV=4) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 71/208 (34.13%), Postives = 95/208 (45.67%), Query Frame = 2 Query: 71 KGRGS--IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKT-RVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 KGR + I TA R +R +DF G + I +D R A + + + K + G G I +G + +GN LPL MP GT I N+E G G L R +G +I ++GK+ +KLPSG ++I VG V G K L +AG ++ KR P RGV MNPVDHPHGGG Sbjct: 37 KGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGKIVTIEYDPNRNAYICLIHYGDGEK-----RYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA---KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKRLGRAG--SKRWLGKR---PVVRGVVMNPVDHPHGGG 231
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_PHAVU (50S ribosomal protein L2, chloroplastic OS=Phaseolus vulgaris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 71/208 (34.13%), Postives = 95/208 (45.67%), Query Frame = 2 Query: 71 KGRGS--IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKT-RVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 KGR + I TA R +R +DF G + I +D R A + + + K + + G G I +G + +GN LPL MP GT I N+E G G L R +G +I ++GK+ +KLPSG ++I VG V G K L GRA K + + P RGV MNPVDHPHGGG Sbjct: 39 KGRNARGIITAGHRGGGHKRLYRQIDFRRNEKNIYGRIVTIEYDPNRNASICLIHYGDGEK-----KYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA---KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNL---GRAGSKCWLGKR--PIVRGVVMNPVDHPHGGG 233
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RK2_PHAAN (50S ribosomal protein L2, chloroplastic OS=Phaseolus angularis GN=rpl2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 71/208 (34.13%), Postives = 95/208 (45.67%), Query Frame = 2 Query: 71 KGRGS--IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKT-RVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 KGR + I TA R +R +DF G + I +D R A + + + K + + G G I +G + +GN LPL MP GT I N+E G G L R +G +I ++GK+ +KLPSG ++I VG V G K L GRA K + + P RGV MNPVDHPHGGG Sbjct: 40 KGRNARGIITAGHRGGGHKRLYRQIDFRRNEKNIYGRIVTIEYDPNRNASICLIHYGDGEK-----KYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA---KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNL---GRAGSKCWLGKR--PIVRGVVMNPVDHPHGGG 234 The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bpback to top |