FC932539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_HALLT (50S ribosomal protein L2P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 89/219 (40.64%), Postives = 119/219 (54.34%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MGR I+ QR+GRG F A + KA + L+ + G + I HD R APLA+++F + +A EG+ G I G +A + GN LPLA +PEG + NVE GD G R SG T++ H+ + V+LPSG K + R +G+VAGGGRT+KP +KAG HK + +P+ RGVAMN VDHP GGG QH Sbjct: 1 MGRRIQGQRRGRGGPTFRAPSHRYKAELSHKKLEDVDT---ITGEIVGIEHDPARSAPLAEIEFEDDDR-----RLVLAPEGVRVGDTIQVGVSAEIKPGNTLPLAEIPEGVPVCNVESNRGDGGKFARASGVSATLLTHDRDVAV--VQLPSGEVKRLDPQCRATIGVVAGGGRTEKPFVKAGNKYHKMKARGTKYPRVRGVAMNAVDHPFGGGGRQH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_HALWD (50S ribosomal protein L2P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 86/219 (39.27%), Postives = 121/219 (55.25%), Query Frame = 2 Query: 44 MGRVIRNQRKGRG-SIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MGR I+ QR+GRG S F A + KA + +E+ G + +I HD R AP+A V+F + +A EG+ G+ + G +A + GN LPL +PEG + NVE + GD G R SG ++ H+ + ++LPSG K + + +G+VAGGGRT+KP +KAG+ HK + WP+ RGVAMN VDHP GGG QH Sbjct: 1 MGRRIQGQRRGRGTSTFRAPSHRYKAELSHKQ---SESDDTITGTIVDIEHDPARSAPVAAVEFDDGDR-----RLVLAPEGIRVGETMQIGVSAEIKPGNTLPLREIPEGVPVCNVESQVGDGGKFARASGTSAQLMTHDRD--VVVIELPSGETKRLSPACQATIGVVAGGGRTEKPFVKAGKKHHKMKARGIKWPRVRGVAMNAVDHPFGGGGRQH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 89/219 (40.64%), Postives = 123/219 (56.16%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MG+ I +Q +GRG+ + A + KA + +D + +G V + HD R AP+AKV F + +A+EG+ G I G +A + GNI+P+ +PEG I N+E K D G R+SG Y TV+ H E +T V +PSG K + R +VGIVAGGGR D+P LKAG+ HK + +P+ GVAMNPVDHP GGG +H Sbjct: 1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFETGEE-----RLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 2 Query: 44 MGRVIRNQRKGRG-SIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQ 694 MG+ I QR GRG S F + + AP ++ + RG++KE++H G AP V + + + A EG+Y G+ I G +A + GN++P+ +PEGT++ N+E++ GD G R+SG Y V+ H D T V+LPSG + + AR +GIVAGGGR +KP +KAG H+ K +PK RG AM+ HPHGGG HQ Sbjct: 1 MGKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVLENGEEMYLP-----AVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQ 211
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36 Identity = 87/219 (39.73%), Postives = 125/219 (57.08%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MG+ + +Q +GRG+ + A + KA + +D + +G V +I HD R AP+AKV F + + ++ A+EG+ G I G +A + GNI+P+ ++PEG I N+E K D G R+SG Y TV+ H P +T V +PSG K + R +VGIVAGGGR D+P LKAG+ HK + +P+ VAMNP DHP GGG +H Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAFENGEELFLL-----ASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPT--RTAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_SULAC (50S ribosomal protein L2P OS=Sulfolobus acidocaldarius GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.760e-36 Identity = 88/218 (40.37%), Postives = 123/218 (56.42%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGSI-FTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQ 694 MG+ + QR GRG I F + + PA++ ++ G +G + +I+H+ G AP+ KV+ + +F + A +G+ GQ I GKNA ++ GNI+ + +PEGTVI NVE+ GD G R +G+Y + G K +KL S + AR VGI+AGGG +KPLLKAG K+ V+ WP RGVAMN V HPHGGG HQ Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGPARYPNIE-----GDHKGKIIDILHNPGVTAPVVKVKLDNGLQFYIP-----AVQGVAVGQEISIGKNATISNGNIVEVGQLPEGTVICNVEKLKGDGGKFARAAGSYAVISGK--AGNKVLIKLSSEKIVEVSQNARATVGIIAGGGFVEKPLLKAGNNYWKYRVRAVKWPVVRGVAMNAVSHPHGGGLHQ 206
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 85/217 (39.17%), Postives = 123/217 (56.68%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGSI-FTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYH 691 MG+ + QR+G+G+ F A + + ++ L+ + G V EI+HD GR AP+A+V+F + + + IA EG+ G+ I G NA + +GN LPLA +PEG+ + ++E GD G R G Y V+ E K V+LPSG K R +G+VAGGGR +KP++KAG+A + + WPK RGV MN V+HPHGG H Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKTLV-GKVVEILHDPGRTAPVARVKFENGME-----KLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSR--EKDKVIVQLPSGELKQFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_METS5 (50S ribosomal protein L2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.523e-36 Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGSIFTANTR-LNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFI-ANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQ 694 MG+ + QR GRG+I N L ++ T+ G+ V +I+H+ G P+AKV+ +F FI A +G+ +GQ I G+ + ++GNI+P +PEG ++NVE GD G RT+G+Y V+G + +GK ++LPSG K I A VG VAGGG +KPLLKAG K+ VK WP RGVAMN V HPHGGG HQ Sbjct: 1 MGKKLLQQRAGRGNINFRNPGWLRVGKVRYPTIT-----GHHIAKVVDILHNPGMTEPVAKVKLDTGIQF------FIPAVQGLISGQKIEVGEGSPASLGNIVPAKDLPEGVYVSNVELHRGDGGRYARTAGSYAIVVGKS--EGKVILRLPSGKIKEIDENALVTVGTVAGGGVLEKPLLKAGNNYWKYKVKATKWPDVRGVAMNVVSHPHGGGLHQ 206
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 88/219 (40.18%), Postives = 123/219 (56.16%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MG+ + +Q +GRG+ + A + KA + +D + RG V I HD R AP+AKV F + + ++ A+EG+ G I G +A + GNI+P+ ++PEG I NVE K D G R+SG Y TV+ H E +T V +PSG K + R +VGIVAG GR D+P LKAG+ HK + +P+ VAMNP DHP GGG +H Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENSSLRGEVVGIEHDPARSAPIAKVAFENGEELFLL-----ASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKH 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_METLZ (50S ribosomal protein L2P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl2p PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 86/219 (39.27%), Postives = 114/219 (52.05%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MG I Q +G+G + A + KA + F A R V +I HD R P+A V+ K E + EG+ GQ + G A + GN LPL+++P G + N+E + GD G R+SG +IG + GK V++PSG K VG+VAGGGR DKP+LKAG+ HK WP+ RGVAMN +DHP GGG HQH Sbjct: 1 MGHRISTQSRGKGGPTYRAPSHQYKAELKH----FGSALETVRATVIDIEHDPARHTPIAVVKIEGKASDKK--EYALITEGVGIGQELVWGPEATVVNGNSLPLSAIPTGVAVCNIEARPGDGGKFVRSSGVQAVIIGKSA--GKVGVRMPSGKPKWFNEACLATVGLVAGGGRIDKPILKAGKQYHKMKTSATRWPRVRGVAMNVIDHPFGGGGHQH 211 The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bpback to top |