FC932539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_NANEQ (50S ribosomal protein L2P OS=Nanoarchaeum equitans GN=rpl2p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 76/220 (34.55%), Postives = 112/220 (50.91%), Query Frame = 2 Query: 44 MGRV-IRNQRKGRGS-IFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGYHQH 697 MG+V + QR+GRGS F + T + T D G ++K+ IH A PL V++ + + A G+ G +Y GK A +G+I PL+ +PEGT I +E GD G L R SG++ ++ + K V+LPSG K + AR ++G++AGGGR +KP +KAG + + + WP GV N DHP GG H + Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHYA----PLMVVKWENGAQ-----SLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSN 209
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 2 Query: 44 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKT-RGVAMNPVDHPHGGGYHQH 697 MG+ I QR+G GS+ + ++P+ D T + ++II GR P+ ++ K MI A G Y Q I+ G + +G++ LA++P+G+ + N+E GD G R +G VI H +KLPSG K R VG +AG G D P+LKAG K+ + P T RGVAMN V+HPHGGG HQH Sbjct: 1 MGKHIVAQRRGHGSL------VYRSPSHRHLGDIKYPRDGTYKI-EDIIQAPGRNTPVLLIRNEKNEKNYMI-----AFNGAYVNQEIHVGDIDSPAIGDVTYLANIPDGSYVYNIESIPGDGGKFCRAAGTAALVISHG---AYVSLKLPSGVNKEFHPRCRATVGFIAGSGARDIPILKAG-THIKYLQSKAKRPYTVRGVAMNAVNHPHGGGNHQH 203
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRSV (50S ribosomal protein L2 OS=Streptococcus sanguinis (strain SK36) GN=rplB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 73/187 (39.04%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT++ N+E K G G L R +G V+G ++GK T V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDAVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLVHNIELKPGRGGELVRAAGASAQVLG---QEGKYTLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRGC (50S ribosomal protein L2 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 73/187 (39.04%), Postives = 98/187 (52.41%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + VGN LPLA++P GT++ N+E K G G L R +G V+G ++GK T V+L SG ++I T R VG+V L KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDAVEAVVKTIEYDPNRSANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPEADIKVGNALPLANIPVGTLVHNIELKPGRGGELVRAAGASAQVLG---QEGKYTLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_JANSC (50S ribosomal protein L2 OS=Jannaschia sp. (strain CCS1) GN=rplB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 66/218 (30.28%), Postives = 106/218 (48.62%), Query Frame = 2 Query: 32 ETVAMGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +++ G + R G I TA R A +R +DF V+ I +D R A +A V++ + +A + + G + A K A + GN +P + +P GT++ N+E K G G + R +G Y +G + G +++L SG ++++ VG V+ +++ L KAGR +H P RGVAMNP+DHPHGGG Sbjct: 31 KSLTEGLTKKGGRNNTGRI-TARRRGGGAKRLYRIVDFKRTKFDVSATVERIEYDPNRTAFIALVRYEDGEQ-----NYILAPQRLGVGDKVVASKKADIKPGNAMPFSGLPIGTIVHNIELKPGKGGQIARAAGTYAQFVGR--DGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNLGKAGRVRH-----MGKRPSVRGVAMNPIDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_MYCAP (50S ribosomal protein L2 OS=Mycoplasma agalactiae (strain PG2) GN=rplB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 67/206 (32.52%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 68 RKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 R +G I T + + +R +DF VK I +D R A + + + K +A EG+ GQ + +G N + VGN LPL+++PEGT + NVE + G G + R++G ++G + + ++L SG + I R +G V G + L KAGR++H V+ P RG MNP+DHPHGGG Sbjct: 44 RNNQGKI-TVRHQGGRVKRYYRIIDFKRNKDDIPATVKSIEYDPNRSANICLLAYADGEK-----RYILAPEGIKVGQKVVSGNNVDILVGNSLPLSNIPEGTFVHNVEMQPGGGGIIARSAGTSAQILGKDDDGKYVVLRLKSGEMRRILARCRATIGTVGNGEHSLVLLGKAGRSRH-LGVR----PTVRGSVMNPIDHPHGGG 238
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRU0 (50S ribosomal protein L2 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rplB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 73/191 (38.22%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSW----PKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G A + +GN LPLA++P GTVI N+E K G G L R +G V+G ++GK V+L SG ++I T R +G V G + L+ G+A RN W P RG MNP DHPHGGG Sbjct: 62 YRVIDFKRNKDNVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIISGPEADIKIGNALPLANIPVGTVIHNIEMKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATIGSV---GNEQQSLVNIGKA------GRNRWKGVRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 71/191 (37.17%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 125 QFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSW----PKTRGVAMNPVDHPHGGG 685 Q+R +DF G V I +D R A +A V + K IA +G+ GQ I +G+NA + +GN LPL S+P GTVI N+E K G G + R++G ++G E+ T V+L SG ++I T R +G V G + L++ G+A R+ W P RG MNP DHPHGGG Sbjct: 61 QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALVHYADGEK-----RYIIAPKGIKVGQEIESGENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQV---GNIEHELVRVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_LACS1 (50S ribosomal protein L2 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rplB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 69/189 (36.51%), Postives = 104/189 (55.03%), Query Frame = 2 Query: 125 QFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRA-KHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 ++R +DF VK I +D R A +A + + K +A +G+ GQ + +GK+ + VGN LPLA++P GTVI N+E K G G L R++G ++G ++GK ++L SG ++I T R +G V G L+K G+A + ++A KR P++RG MNP DHPHGGG Sbjct: 61 KYRLIDFKRVKDNVPATVKAIEYDPNRSANIALLVYADGVK-----SYILAPKGLKVGQVVESGKDVDIKVGNTLPLANIPVGTVIHNIELKPGKGGQLVRSAGTSAQLLG---KEGKYAIIRLTSGEVRMILVTCRATIGAV---GNEQHELIKVGKAGRARWAGKR---PQSRGSVMNPNDHPHGGG 235
BLAST of FC932539 vs. ExPASy Swiss-Prot
Match: RL2_STRS7 (50S ribosomal protein L2 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rplB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 128 FRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGK-TRVKLPSGAKKVIKNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGG 685 +R +DF VVK I +D R A +A V + K +I A +G+ GQ I +G +A + +GN LPLA++P GTV+ N+E K G G L R +G V+G ++GK V+L SG ++I T R VG V ++ + KAGR++ K P RG MNP DHPHGGG Sbjct: 62 YRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYII-----APKGLEVGQRIVSGPDADIKIGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLG---QEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQQSLVNIGKAGRSRWK-----GIRPTVRGSVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of FC932539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932539 ID=FC932539; Name=FC932539; organism=Citrus clementina; type=EST; length=699bpback to top |