FC932540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18 Identity = 59/145 (40.69%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 VLI++ L ++L + V NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G L +LG Sbjct: 9 VLISDSLDPCCREILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTSDVI-NAAKKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMILCLARQIPQATASMKDGKWERKKFMGTELNGKVLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 52/119 (43.70%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV D+ ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G L +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTSDII-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERKKFMGTELNGKVLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.539e-18 Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 VL+++ + Q G+D+L + A VD LS E+ + DA+++RS TKV + ++ + +LK++GRAGVG+DN+D+ AAT G + R++ A+ SVK KW+R +++G + TL V+G Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYKKTLGVVG 174
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 52/146 (35.62%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 234 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 P VLIA+KL Q+ + L + V +L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R +A+ADAS++A W+R+ + G + G T+ V+G Sbjct: 4 PVVLIADKLAQSTVAALGDQVEVRWVDGPDRTKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFSGTEIFGKTVGVVG 148
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAY-NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 VL+++K+ GL L E ++ N++ E ++ DAL+VRS TKV D+F LK+VGRAGVG+DN+D+ AT+ G + R++ QA+ SVK+ +W R YVG L G TL ++G Sbjct: 4 VLVSDKMSNDGLQPLIESDFIEIVQKNVADAE--DELHTFDALLVRSATKVTEDLFNKMTS-LKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVG 145
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 234 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 P VLIA+KL + + L + V ++L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + G T+ V+G Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVG 148
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 234 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 P VLIA+KL + + L + V ++L + DAL+VRS T V+ +V ++A +LK+V RAGVG+DNVD+ AAT G L R + ADAS++ W+R+ + G + G T+ V+G Sbjct: 4 PVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVL-AAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVG 148 The following BLAST results are available for this feature:
BLAST of FC932540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932540 ID=FC932540; Name=FC932540; organism=Citrus clementina; type=EST; length=673bpback to top |