FC932545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_LACGA (Elongation factor Tu OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tuf PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD 654 + K H+NI IGHVD GK+T T + L E + + +D E+ERGITI+ A ++ET + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK+D D + EV L + Y D +P + + +GD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQ---------------IDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVKYIVVFLNKVDLVD---DPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGD 183
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 66/189 (34.92%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV 630 + K H+NI IGHVD GK+T T + L ++ +S K+ + D ER RGITI+ A ++ET K+Y +D PGH D++KNMITG +Q D A+L+ + G QTREH LLA +GV ++ NK D + + + EV L+K + +IPFV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAISATL---------------SQYTGKSKKFDEI-DSAPEERARGITINTAHVEYETDKWYYAHVDCPGHADYVKNMITGAAQMDGAILVCSAANGPMP-------QTREHILLAKQVGVPYIVVFLNKADMVD---DEELLELVQLEVQELLEKYDFPGSEIPFV 170
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_EXISA (Elongation factor Tu OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 64/196 (32.65%), Postives = 97/196 (49.49%), Query Frame = 1 Query: 58 MGKEKV-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV 630 MGKEK H+N+ IGHVD GK+T T + L + +F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NK+D + + + E+ L + + D +P + Sbjct: 1 MGKEKFDRSKPHVNVGTIGHVDHGKTTLTAAISAVLSKAQGKAATKFDQ---------------IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLSRQVGVPYIVVFMNKVDMVD---DEELLELVEMEIRELLSEYDFPGDDLPVI 171
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 64/190 (33.68%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFV 630 +++ H+N+ IGHVD GK+T T + L +R+E +DK ER RGITI+ A ++ T + + D PGH D++KNMITGT+ D +L++ +T G QTREH LLA +GV+ ++ NK DA S A +V+ E+ L ++GY+ ++ P V Sbjct: 43 RDRPHVNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAV----SDAELLPLVELELRELLAEMGYDAERTPVV 206
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 55 IMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 645 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ D P + S F Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAF 175
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 63/197 (31.98%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 55 IMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 645 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ D P + S F Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAF 175
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_BDEBA (Elongation factor Tu OS=Bdellovibrio bacteriovorus GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 67/200 (33.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD 654 + K H+NI IGHVD GK+T T + L K +++ +DK E+ RGITI ++ET + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D K + + EV L K + D IP V + EGD Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITTTLAASGKAQAMAYDQ---------------IDKSPEEKARGITISTTHVEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPALVVFMNKVDMVD---DKELLELVELEVRELLSKYEFPGDDIPVVKGSALKALEGD 182
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU2_SHESM (Elongation factor Tu 2 OS=Shewanella sp. (strain MR-4) GN=tuf2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 73/228 (32.02%), Postives = 113/228 (49.56%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPDKIPFV---PISGFEGD-----NMIERSTNLDWYRAHPS*ALDR 720 + K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GV +I NK D A E+V+ EV L + + D +P + + EG+ +IE + LD Y P +D+ Sbjct: 8 RNKPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVPFIIVFMNKCDMV----DDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKIIELAAALDSYIPEPERDIDK 209
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21 Identity = 70/199 (35.18%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPDKIPFVPISGFE 648 + K H+NI IGHVD GK+T T + L +K AE+ YA + D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D +EI++ E+ L + D IP V +SG + Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVDD-------EEIIELVELEIRELLSSYDFPGDDIPVVQVSGLK 177
BLAST of FC932545 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21 Identity = 66/208 (31.73%), Postives = 97/208 (46.63%), Query Frame = 1 Query: 64 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDW 687 + K HINI IGHVD GK+T T + L + ++ +D ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L+I +T G QTREH LL+ +GV ++ NK D + + + + EV L + + D P V S F+ + T +W Sbjct: 8 RTKPHINIGTIGHVDHGKTTLTAAITAVLAVAGDTELMDYD---------------AIDNAPEERERGITIATSHVEYETATRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAATDGPM-------AQTREHILLSKQVGVPYIVVFLNKEDQLDDEDKEEMLELVEMEVRELLSEYDFPGDDTPIVAGSAFQALEEAKTGTLGEW 193 The following BLAST results are available for this feature:
BLAST of FC932545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932545 ID=FC932545; Name=FC932545; organism=Citrus clementina; type=EST; length=722bpback to top |